Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03194 ATGGTATCTAAAAACCCCAACCCTTCTGAGGCTTACTACATGGACCCCTCTGCTATGTCGCTCCCCGGAATACTCCCTTTTGCCACCGCTACCGCCGCCGCCGATTCCCTCGAGGACCCTGCTAAGAAGACTCGCAAACCTTACACTATCACCAAGTCTAGGGAGAGTTGGACCGAACCCGAGCACGACAAGTTCCTCGAAGCTCTTCAGTTATTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATCCAGATACGAAGCCATGCTCAGAAATACTTTCTGAAAGTTCAGAAGAATGGGACAAGTGAACATCTTCCTCCACCCAGACCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCAAAAAATGTTCCAGTGCTCTCACAAGTATCAGGGTCCTTTCAATCATCATCGGCTTTGCTTGAACCAGGGTACATAATGAAGCGTGATTCTTCAGCAATGCTTAAAACCCCTATTATTAACGCTGCAGCGTCTTCCTGGTCAAACAACTCTCTGCAGAAAAGCACTAATTTATTGCATGGCCACAAAGTGAATAATTGTTGCAGTAACAGTGGAAGTCCTAGAGCAAAGTTGGTTGGTGAATCTAATGGTCAAGGGAATAATATCCATCCTCTGAGAGTTCTTCCAGATTTTGGTCAGGTATACGGCTTCATTGGCAGTGTATTTGATCCAAATGAAAGTGGACATCTGCAGAAACTAAAACGAATGGACCCTATAGATGTTGAGACTGTGCTACTGTTGATGAGAAACCTGTCTATCAATTTAGTAAGCCCAGATTTTGAGGACCATAGAAGGCTGCTAGCATCATATGAGGTTGAACCTGAGTCAGATAACTATTATATCAATGTGGATCGAAACATGCTTGATGAGCAGTTGAAGAGTGTTACTTAG 936 0.437 MVSKNPNPSEAYYMDPSAMSLPGILPFATATAAADSLEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHLPPPRPKRKAAHPYPQKASKNVPVLSQVSGSFQSSSALLEPGYIMKRDSSAMLKTPIINAAASSWSNNSLQKSTNLLHGHKVNNCCSNSGSPRAKLVGESNGQGNNIHPLRVLPDFGQVYGFIGSVFDPNESGHLQKLKRMDPIDVETVLLLMRNLSINLVSPDFEDHRRLLASYEVEPESDNYYINVDRNMLDEQLKSVT 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03194 311 MobiDBLite consensus disorder prediction 104 128 - -
Viun7g03194 311 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Viun7g03194 311 SMART sant 53 101 IPR001005 -
Viun7g03194 311 PANTHER SWI/SNF COMPLEX-RELATED 37 271 - -
Viun7g03194 311 Pfam Myb-like DNA-binding domain 54 99 IPR001005 -
Viun7g03194 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
Viun7g03194 311 CDD SANT 56 99 IPR001005 -
Viun7g03194 311 FunFam protein REVEILLE 6 isoform X1 56 104 - -
Viun7g03194 311 ProSiteProfiles SANT domain profile. 52 105 IPR017884 -
Viun7g03194 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 52 101 IPR006447 GO:0003677
Viun7g03194 311 Gene3D - 57 104 - -
Viun7g03194 311 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03194 Viun-Chr7 34458397 34462072 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g03194 Myb_DNA-binding 3.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03194 - - gmx:100794389 508.064