Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03187 ATGGATGAGGACTGGGATCTCTTCGCCATCGTGAGAAGCTGCCAATCAAATACTTCCACCGCAGCAATTCCAGAAACCACCACCAATACTACTTCATCTTCTCTCCTCACTTCCATTGTAGAGGAAGATAGATACGATGCATTTTCCTTTCCCAATACAGTGGAACCCATAACCAACGACTTCCACGAGCTGCACCAATTGTTTTCACCCTTTAACCCCACCACTACCCTTAGTGCTCCTGGCATCAATCCTAATTCCCCTTATTTTGCACAACAGGAAAGCCAGCAAATCAGTGACCACCTTCCCCTTTGGCCTCATTTTGTGCCAGAACCCTCCACCCCCAGCTTCAATAGATTCCCTCACCATCAACAACACCAACACAATCAACTACACTCACTTCACAAACACGAATTTCATACACCCCACAACAATTCACCCACACTTTCACCAAACACACAACCTCAAACACCCAAATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGCCAGGTAACCGCAGATAACCTCTCGGCAGATTTGTGGGCATGGCGAAAATACGGACAAAAACCAATTAAGGGTTCTCCTTATCCAAGGAATTACTATAGGTGTAGCAGCTCCAAAGGTTGTATGGCTCGAAAACAAGTTGAACGGAGTAACACCGAAACCGATATGTTCATCGTTACGTACACCGGCGACCACTCGCATCCCCGGCCAACCCATCGGAACTCGCTCGCCGGAAGTACTCGAAGTAAAAATCCGACGACGAATCCGCCGGCTTTACCCGGGTCACTCTCCTTCCAAGCCGCCCCCTTTTCTTCTTCTTCTTCTCCGCCACTCTCTCCAACGTCGCCGTCGGAAGATCCACAGGAAGCCGGCGATGTGGAACCTGACCCGGACATGGAAACCGACATGGACGATGACGGTGACATCCGATGA 942 0.4894 MDEDWDLFAIVRSCQSNTSTAAIPETTTNTTSSSLLTSIVEEDRYDAFSFPNTVEPITNDFHELHQLFSPFNPTTTLSAPGINPNSPYFAQQESQQISDHLPLWPHFVPEPSTPSFNRFPHHQQHQHNQLHSLHKHEFHTPHNNSPTLSPNTQPQTPKSRKRKSQQKKMVCQVTADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCMARKQVERSNTETDMFIVTYTGDHSHPRPTHRNSLAGSTRSKNPTTNPPALPGSLSFQAAPFSSSSSPPLSPTSPSEDPQEAGDVEPDPDMETDMDDDGDIR 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03187 313 SMART WRKY_cls 179 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g03187 313 MobiDBLite consensus disorder prediction 292 313 - -
Viun7g03187 313 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 303 IPR044810 GO:0003700
Viun7g03187 313 Pfam WRKY DNA -binding domain 181 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g03187 313 MobiDBLite consensus disorder prediction 112 170 - -
Viun7g03187 313 MobiDBLite consensus disorder prediction 230 313 - -
Viun7g03187 313 ProSiteProfiles WRKY domain profile. 174 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun7g03187 313 FunFam WRKY transcription factor 22 162 233 - -
Viun7g03187 313 Gene3D WRKY domain 162 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun7g03187 313 MobiDBLite consensus disorder prediction 242 282 - -
Viun7g03187 313 MobiDBLite consensus disorder prediction 142 159 - -
Viun7g03187 313 SUPERFAMILY WRKY DNA-binding domain 176 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03187 Viun-Chr7 34412245 34414573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03187 158 302 WRKY Transcription Factor Family AT5G52830 61.905 4.41e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun7g03187 WRKY 3.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03187 - - gmx:100792164 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02032 4 36094580 36096592 Viun7g03187 7 34412245 34414573 ECH
Viun10g01982 10 34532272 34534076 Viun7g03187 7 34412245 34414573 ECH
Viun5g00823 5 5184180 5186153 Viun7g03187 7 34412245 34414573 ECH
Viun10g02618 10 39752376 39757458 Viun7g03187 7 34412245 34414573 ECH
Viun7g03187 7 34412245 34414573 Viun7g03187 7 34412245 34414573 ECH
Viun4g02032 4 36094580 36096592 Viun7g03187 7 34412245 34414573 PCT