Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03182 ATGGAACACCAATCGTCACCGCCACCGCCACCACCATCCAAAACCTACACACTAACCGCCACCTCGATATGCTACACCAAATCCTCCTCCACCAGACTGCCTCTCTTCTTCAACCATTGCACCACCACCCCTCCAGCCTACATCCTCAAGGATGTCTCCCTCACCGCCCACCCTTCCCAAATCCTCGCCGTGGTGGGCCCTAGCGGCGCCGGCAAGTCCACCCTCCTGGACATCCTCGCCGCCCGCACCCTCCCCTCCCACGGCACCCTCTCCCTCAACTCTTCCCCTCTCCTCCCCTCCTCCTTTCGCAAGCTCTCCTCCTACGTCCCCCAACACGACCACTCCCTCCCTCTCCTCACCGTCTCCGAAACCTTCCTCTTTGCCGCCACCCTCCTCAAACCCTCCGCCCCCAACCTCCGCGCCCTCGTCTCCCAACTCCTTTCCCAACTGCGCCTCTCCCATCTCGCCCACACGCGCCTCGCCCACGGCCTCTCCGGCGGCGAACGCAGAAGGGTCTCCATCGGTCTCAGCCTCCTCCACGATCCCGCCGTGCTACTCCTCGACGAACCCACCTCGGGGCTTGACAGCACTTCCGCCTTCAAAGTCATGCAGATTCTCAAACAAACTTGCCTCTCTCGCAACAGAACCATCATCCTCTCCATCCACCAACCCAGCTTCAAGATCCTCTCCTGCATTGACAGGATATTGCTGCTTTCCAAGGGAACCGTAGTTCATCATGGAACCGTTGCCACCTTGCAAGCCTTCTTGCACTCCAATGGCTACACCGTCCCTCACCAACTCAATGCCTTGGAATATGCCATGGAGATTTTGAATGAGATTAAACCTCTCACTCCACCCAGTCTTCCGGAGTCGCCTGAAAGTTCAAGTTCAAGTTCAGTAAATTTGGTTCCTGGTGGTGGACGAACAGGGAACAGTGGAGAGAGCATCATGTATAAAAGCTCTAGGGTGCACGAGATTTTCACTCTTTACGTCAGATTTTGGAAGATTATTTACCGAACAAGGCAACTTCTTCTGACCAACACTGCTGAAGCGCTTCTGGTGGGGCTTGTGTTGGGAACTATTTATATCAACATAGGTTTTGGTAAAGAAGGGATCGAGAAAAGGTTTGGTCTGTTTGCTTTCACTCTCACCTTTCTCTTATCTTCCACCACCGAAACCCTTCCCATCTTCATCAACGAGAGGCCTATCATATTAAGAGAAACTTCCAGTGGGGTTTATAGGCTCTCTTCTCATCTCATTGCAAATACGCTTGTTTTCTTGCCCTACTTGTTCGTTGTTGCTGTTATGTATTCTATCCCGGTTTACTTCTTAGTTGGCCTCTGTGCTTCATGGTTTTCTTTTGCTTACTTTGTCCTCGTCATTTGGGTCATAGTTCTCATGGCAAACTCCTTCGTACTCTTTTTGAGCTCTCTTGCACCCAACTATATCTCCGGAACTTCCCTCTTGACGGTGCTTCTGGCGGCGTTTTTTCTGTTCTCCGGTTACTTTATCTCCAAGGATAGCTTGCCCAAGTACTGGCTCTTCATGCACTTCTTGTCCATGTACAAATATGCTCTTGACGCTCTTCTCATCAACGAGTACTCGTGCTTGCTGACAAAGTGTTTGATATGGTACCAAGAGAATGAAGAGTGCATGATCACCGGCGCTGACGTGCTACAGAAGAGAGGGATTAAGGAGAGTGAAAGGTGGACCAACGTGTACATCTTGATCAGCTTCTTTGTGGTGTATCGTTTGCTTTGCTTCTTGGTTTTGATTCGGAGGGTGTCGAGATCCAAAACATAA 1803 0.5136 MEHQSSPPPPPPSKTYTLTATSICYTKSSSTRLPLFFNHCTTTPPAYILKDVSLTAHPSQILAVVGPSGAGKSTLLDILAARTLPSHGTLSLNSSPLLPSSFRKLSSYVPQHDHSLPLLTVSETFLFAATLLKPSAPNLRALVSQLLSQLRLSHLAHTRLAHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKQTCLSRNRTIILSIHQPSFKILSCIDRILLLSKGTVVHHGTVATLQAFLHSNGYTVPHQLNALEYAMEILNEIKPLTPPSLPESPESSSSSSVNLVPGGGRTGNSGESIMYKSSRVHEIFTLYVRFWKIIYRTRQLLLTNTAEALLVGLVLGTIYINIGFGKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPIILRETSSGVYRLSSHLIANTLVFLPYLFVVAVMYSIPVYFLVGLCASWFSFAYFVLVIWVIVLMANSFVLFLSSLAPNYISGTSLLTVLLAAFFLFSGYFISKDSLPKYWLFMHFLSMYKYALDALLINEYSCLLTKCLIWYQENEECMITGADVLQKRGIKESERWTNVYILISFFVVYRLLCFLVLIRRVSRSKT 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03182 600 Pfam ABC transporter 49 192 IPR003439 GO:0005524
Viun7g03182 600 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524|GO:0016887
Viun7g03182 600 Pfam ABC-2 type transporter 325 534 IPR013525 GO:0016020|GO:0140359
Viun7g03182 600 SMART AAA_5 58 242 IPR003593 GO:0016887
Viun7g03182 600 MobiDBLite consensus disorder prediction 285 308 - -
Viun7g03182 600 Pfam ABC-2 type transporter 222 280 IPR043926 GO:0140359
Viun7g03182 600 FunFam ATP-binding cassette transporter 38 258 - -
Viun7g03182 600 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 585 - -
Viun7g03182 600 MobiDBLite consensus disorder prediction 290 308 - -
Viun7g03182 600 Gene3D - 36 279 IPR027417 -
Viun7g03182 600 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 265 IPR003439 GO:0005524
Viun7g03182 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 256 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03182 Viun-Chr7 34391808 34393929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03182 42 259 Calmodulin-binding Proteins AT2G36910 27.016 5.24e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03182 K05681 - gmx:100790712 904.434