Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03178 ATGGAACAGAAACACGTGTTGTTGTCAGCATTGAGTGTTGGGGTTGGATTGGGTGTAGGACTTGGATTGAGTACAGGACAGGCTGTTCAAAAATGGGTGAGAGGGAGTTGTGAATCAGATGAGATTTCTGGGGAGCAAATTGTGCTGGAGCTGAACAACAAAGTCATTGATGGGAAGAACAGCAAAACCACATTCAAGGACTTTCCTTATTACTTAAGTGAAAGAGACCAATTTTTGTTAACAAGTGCTGGATATGTTTATTTGAAACAAAACTTTTCCAAGCACATGAGGAACCTTTGTCCAGCTAGCAGAGCTATGTTGCTTTCTGGACCTGCAGAACTTTATCAGCAAAAGCTTGCCCAAGCTTTAGCTCATCACTTTGAATCGAAGTTACTGTTGCTAGACATAATTGACTTCTCATTGGAGATGCAGAGGAAATATGGATGTCCCCGAAAAGAACCGTATTTTAAAAGGTCCATTTCTGAGGTGACTTTGGAGCGAGTGTCGGATTTGTTTGGGTCCTTTACAATCCTCCCTTCAACTGGCAGAATCAGAGGTACACTACTTCGACAGAGTAGTGAAATTGAAAATTCCAGCAATCCTCTGAAACTTTTTAGGAATGCCTCTACTGCATGTGATACGATTAGCTCTTCTCAATGTGATCAATCAGATCCAGCTCCTTTGAAGGGCACAAGCGGCTTCTGTTTTGATGAAAAGCTCTTCGTGCAATCACTTTATAAGGTCTTGGTTTCCATCTCGGAAACCAGTTCCATTATTTTATACATTAAGGATGCTGAGAAGCTCTTTGTTCGATCACCAAGGCTACACAATTTGTTCCAAAATCTACTAAAGAAACTTTCAGGACCAGTACTAATACTCGGTTCGCAGATATTGGATCATGAAAATTATAAAGAAGTTGATGAGAAGCTCACAATGTTATTCCCTTACAACATTGAGATCAAAGCACCTCAAAATGACAGCGATCTTGCAAGCTGGAAAACCAAACTGAAAGAGGACACGAAAACAATTCTGTTTCAAGATACCAGAAACCACATTGCTGAAGTACTTGCAGCAAGTGATATTGATTGTGATGACTTGAATTCCGTCTGCCATTCTGACACTACGCTGCTCAGTAATTGGATTGAAGAGATTGTGGCATCTGCGGTTTCTTTCCACTTAAGGGAGACTAAAGATCCAGAATACCGGAATGGAAAATTACTTATATCAGCCAATAGTTTGTCCCATGTGTTAAGTTTGTTCCAGGAAAGTGAAAGTAATTCGGAGACTAAAGATTCAAACAAGGATGTTCCTCCTGACAACGAGTATGAGAAGCGCATGAGAGCAGATGTTGTGCCTGCAAAAGAGATAGGAGTTAGATTTGAAGATATTGGTGCATTGGATGATATTAAAGAAATACTTCAAGATGAAGTCCTACTTCCCCTCAGAAGACCAGATTTATTCAATGGTGGGCTTTTGAAGCCTTATAAAGGTATATTGCTTTTTGGGCCTCCTGGTACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATCAATGTCTCAATCTCGACCATCACTTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTCTGTTTTCACTAGCAGCAAAGGTTGCTCCAACTATTATTTTCATTGATGAGGTTGATAGCATGCTTGGGCAACGGACTAAATCTGGGGAGCATGAGGCAATGAGAAAGATTAAAAATGAATTCATGGTCCACTGGGATGGCCTATTGTCAAAACCTGGTAAGCGTATTCTGGTTCTTGCTGCAACTAACAGGCCATATGACCTTGATGAAGCAATTATAAGACGGTTTGAGCGTAGGATCATGGTTGGTATTCCATCTGCTGAGAACAGGGAAATGATCTTGAAAACTCTCCTAGCTAAGGAAAAATATGAAAATATTGACTTTAAAGAGCTTTCAATCATGACAAAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCACGGCTGCTGCTTATCGACCTGTTAGAGAGCTACTACGACAAGAGAGGATTAAGGAAAATAAGAAAACGGAAGCAGAAGTTCAAATCTCAGAAAATGCATCTGATGCTAAAGAAGATAAAGAAAACCGAGTTATTACTTTGAGACCTATAAACATGGATGACATGAGACAGGCAAAGAGTCAGGTGACTGCTAGTTTTGCAGCAGAAGGATCAATAATGAGTGAGCTTGAGGAGTGGAATGATTTGTTTGGAGAAGGAGGTTCAAGGAAGAAGAAGCAGGAGCAGCTTACTTATTTCCTTTAA 2319 0.4019 MEQKHVLLSALSVGVGLGVGLGLSTGQAVQKWVRGSCESDEISGEQIVLELNNKVIDGKNSKTTFKDFPYYLSERDQFLLTSAGYVYLKQNFSKHMRNLCPASRAMLLSGPAELYQQKLAQALAHHFESKLLLLDIIDFSLEMQRKYGCPRKEPYFKRSISEVTLERVSDLFGSFTILPSTGRIRGTLLRQSSEIENSSNPLKLFRNASTACDTISSSQCDQSDPAPLKGTSGFCFDEKLFVQSLYKVLVSISETSSIILYIKDAEKLFVRSPRLHNLFQNLLKKLSGPVLILGSQILDHENYKEVDEKLTMLFPYNIEIKAPQNDSDLASWKTKLKEDTKTILFQDTRNHIAEVLAASDIDCDDLNSVCHSDTTLLSNWIEEIVASAVSFHLRETKDPEYRNGKLLISANSLSHVLSLFQESESNSETKDSNKDVPPDNEYEKRMRADVVPAKEIGVRFEDIGALDDIKEILQDEVLLPLRRPDLFNGGLLKPYKGILLFGPPGTGKTMLAKAIANEAGASFINVSISTITSKWFGEDEKNVRALFSLAAKVAPTIIFIDEVDSMLGQRTKSGEHEAMRKIKNEFMVHWDGLLSKPGKRILVLAATNRPYDLDEAIIRRFERRIMVGIPSAENREMILKTLLAKEKYENIDFKELSIMTKGYTGSDLKNLCTAAAYRPVRELLRQERIKENKKTEAEVQISENASDAKEDKENRVITLRPINMDDMRQAKSQVTASFAAEGSIMSELEEWNDLFGEGGSRKKKQEQLTYFL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03178 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 457 688 IPR027417 -
Viun7g03178 772 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 50 771 - -
Viun7g03178 772 Pfam ATPase family associated with various cellular activities (AAA) 498 627 IPR003959 GO:0005524|GO:0016887
Viun7g03178 772 MobiDBLite consensus disorder prediction 427 441 - -
Viun7g03178 772 ProSitePatterns AAA-protein family signature. 601 620 IPR003960 GO:0005524|GO:0016887
Viun7g03178 772 SMART AAA_5 494 631 IPR003593 GO:0016887
Viun7g03178 772 Pfam AAA+ lid domain 650 686 IPR041569 -
Viun7g03178 772 Coils Coil 680 712 - -
Viun7g03178 772 Gene3D - 630 705 - -
Viun7g03178 772 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 457 631 - -
Viun7g03178 772 Gene3D - 457 629 IPR027417 -
Viun7g03178 772 MobiDBLite consensus disorder prediction 422 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03178 Viun-Chr7 34352286 34359877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03178 453 703 Calmodulin-binding Proteins AT3G56690 33.725 3.20e-34 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03178 - - gmx:121172906 1191.79