Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03168 ATGCCAACATGTTTCATTTTCTTTGATCTCAATCCAAATAGAGACACTCCTGTATCCCAAGATGCGACATTGGAGCTTGACACCACTGGTAACCTCGTTCTCGTGGATGGAGACATCACAGTGTGGACCTCAAACACCTCAGGTGCTGGCGTACAAGCAGCAGTCATGGCAGAATCCGGCAACTTCATCCTCCAGAACGCCACCAACCACCCTGTGTGGCAGAGTTTTTCTCAACCTTCCGACACTCTCCTCCCCAACCAGCTTCTAACAGTGTCTTCAGAACTAACTTCATCAAAGTCTTCTTCTCATGGTGGCTACTATTCTCTCAAAATGCTTCAACAGCGTACTTCATTAAGCCTTGCTCTCACTTACAATCTCCTCGAGACTTACCAGGCCTCAGATGAATCATACACCAACTATTCCTATTGGAAAGGCCCTGATATCTCCAATGTGACTGGGGAGGTTATAGCAGTTTTGGACCATGCTGGGAGCTTTGGGATTGTGTATGGAGACTCATCTGATGGTGCGGTGTATGTGTACAAGAATGATGGTGACGATGCAGGCTTGCCTTCTGCAGTTCATCAATCAACAGCATCGACTGTTCTCAGGAGATTGACACTGGAAAAGAATGGCAATCTGCGGTTGTATCGATGGGACGAAGTGAATGGCTCAAGGCAGTGGGTGCCACAGTGGGCTGCAGTTTCAAATCCATGTGACATTGCTGGAGTTTGTGGCAATGGGGTTTGCAATTTGGATAGAAGCAAGACAAAAGCCACTTGCACTTGCTTGCCAGGAACTTCTAAAGTTGGAAGGGATGGCCTGTGCTATGAGAATTCATCTCTTGTGGGAAAATGCAATGGCAGGCATGAAAACCAGACATCCCAGTTTAGGATTTCGACGGTGCAGCAAACCAACTATTATTTCTCTGACATTTCAGTTATAGCTAACTACAGTGATATTTCTAATGTGTCAAAATGTGGGGATGCTTGCTTGTCGGAATGTGATTGCGTGGCTTCTGTTTATGGGCTAAGTGAGGAGAGAGCGTATTGTTGGGTGTTGAGGAGCTTAAGTTATGGTGGTTTTGAGGATACAGGCTCAACTTTGTTTGTGAAGGTAAGAGCAAATGGGTCGTGGACTCCAGAAGGCCAAGAAGGAGGGTCTAGTAATAGCTCTTCTGATGGAATGGGAAGTGCAAAGGAGAAGGCTGTGATTATTCCCACTGTTGTGAGCATGGTAGTTCTCATTGTTTTGCTGAGTTTATTACTGTATTACAGTGTTCACAGGAAAAGAACTTTGAAAAGGGAGATGGAAAGTTCCTTGATCTTATCAGGTGCTCCAATGAATTTCACATATCGTGATTTGCAGATTAGGACATGCAACTTTTCACAGCTGCTAGGAACAGGTGGATTTGGGAGTGTATATAAAGGAAGCCTGGGTGATGGTACTCTGGTGGCAGTGAAGAAACTTGACAGGGTTTTGCCTCATGGAGAGAAGGAATTCATAACTGAAGTAAACACTATTGGCTCAATGCATCATATGAATTTGGTTCGCCTATGCGGCTATTGCTCTGAGGGATCACATAGGCTTCTGGTTTATGAGTTCATGAAGAATGGGTCCTTGGATAAGTGGATCTTCCCTTCGTATCAGGGGCGAGATAGACTGTTAGATTGGACAACTCGTTTCAATATAGCCATAGCTACTGCACAAGGGATTGCATACTTTCATGAGCAATGCAGGGATCGGATAATACACTGTGACATAAAACCAGAGAATATATTGGTGGACGAAAACTTTTGTCCTAAAGTGTCTGATTTTGGACTGGCGAAATTGATGGGAAGGGAGCACTCTCATGTGGTGACAATGGTGAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTGGTAATCGTCCTATAACTGTCAAAGCTGATGTTTACAGCTATGGGATGCTTCTTTTAGAGATCATTGGTGGTAGGAGAAATCTTGACATGTCCTTTGGCCCCGAGGATTTCTTCTATCCTGGTTGGGCTTACAAGGAGATGACAAATGGGGCAACAATTAAAGTGGCAGATAGAAGATTAAATGGGGCAGTTGATGAAGAAGAGCTAACGAGAGCTCTGAAAGTTGCATTTTGGTGCATCCAAGATGAGGTATCCATGCGACCAACAATGGGGGAAGTGGTGAAACTGCTGGAAGATTCGGTGGACATTAATATGCCACCGATGCCACAAACAGTGCTAGAGTTAATTGAGGAAGGCTTAGACCATGTATACAAAGCTATGAAAAGAGAGAATAATCACTCAAGCTCATTCACTCTTACCAGCCATCTCACGTCTCGTGCCACATGTAGCAATTCCACAATGTCACCTAGATAA 2376 0.4461 MPTCFIFFDLNPNRDTPVSQDATLELDTTGNLVLVDGDITVWTSNTSGAGVQAAVMAESGNFILQNATNHPVWQSFSQPSDTLLPNQLLTVSSELTSSKSSSHGGYYSLKMLQQRTSLSLALTYNLLETYQASDESYTNYSYWKGPDISNVTGEVIAVLDHAGSFGIVYGDSSDGAVYVYKNDGDDAGLPSAVHQSTASTVLRRLTLEKNGNLRLYRWDEVNGSRQWVPQWAAVSNPCDIAGVCGNGVCNLDRSKTKATCTCLPGTSKVGRDGLCYENSSLVGKCNGRHENQTSQFRISTVQQTNYYFSDISVIANYSDISNVSKCGDACLSECDCVASVYGLSEERAYCWVLRSLSYGGFEDTGSTLFVKVRANGSWTPEGQEGGSSNSSSDGMGSAKEKAVIIPTVVSMVVLIVLLSLLLYYSVHRKRTLKREMESSLILSGAPMNFTYRDLQIRTCNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPSYQGRDRLLDWTTRFNIAIATAQGIAYFHEQCRDRIIHCDIKPENILVDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVGNRPITVKADVYSYGMLLLEIIGGRRNLDMSFGPEDFFYPGWAYKEMTNGATIKVADRRLNGAVDEEELTRALKVAFWCIQDEVSMRPTMGEVVKLLEDSVDINMPPMPQTVLELIEEGLDHVYKAMKRENNHSSSFTLTSHLTSRATCSNSTMSPR 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03168 791 PANTHER OS07G0415500 PROTEIN 17 743 - -
Viun7g03168 791 FunFam serine/threonine-protein kinase PBS1-like 427 534 - -
Viun7g03168 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Viun7g03168 791 CDD STKc_IRAK 465 732 - -
Viun7g03168 791 Pfam D-mannose binding lectin 13 94 IPR001480 -
Viun7g03168 791 Gene3D - 9 113 IPR036426 -
Viun7g03168 791 SUPERFAMILY Protein kinase-like (PK-like) 437 731 IPR011009 -
Viun7g03168 791 Pfam S-locus glycoprotein domain 193 266 IPR000858 GO:0048544
Viun7g03168 791 Gene3D Phosphorylase Kinase; domain 1 423 534 - -
Viun7g03168 791 SMART serkin_6 459 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03168 791 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 535 741 - -
Viun7g03168 791 ProSitePatterns Protein kinases ATP-binding region signature. 465 488 IPR017441 GO:0005524
Viun7g03168 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 13 94 IPR036426 -
Viun7g03168 791 PIRSF SRK 11 786 IPR024171 GO:0004674
Viun7g03168 791 ProSiteProfiles Bulb-type lectin domain profile. 1 77 IPR001480 -
Viun7g03168 791 Gene3D Transferase(Phosphotransferase) domain 1 535 747 - -
Viun7g03168 791 ProSiteProfiles Protein kinase domain profile. 459 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03168 791 Pfam Protein kinase domain 462 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03168 791 SMART blect_4 5 79 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03168 Viun-Chr7 34258519 34263097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03168 430 741 Receptor kinase-like Gene Family AT5G20050 45.092 3.60e-79 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun7g03168 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03168 - - pvu:PHAVU_007G0773000 1442.56