Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03167 ATGGCCAATGCTCCTTCCTCTTCCTTTTCATGTTACTGCATAATTCTTGCTTTGGGCCTCTTTTCTTTTAGTACCTGCATTTCGGCCCACGTTGCCTTGGGCTCCAGGTTATTGTCTAGCAAGGCCCAAACTTGGGTTTCGGAAAACGGCACATTTGCTTTGGGGTTTACTCCGGCAGATAGCGATAATCGATTGTTTGTGCTTGGCGTTTGGTTTGCACAGCTTCCAGGAGATCCAACTGTAGTTTGGTCACCCAATAGAGACACTCCTGTATCCCAAGATGCGACATTGGAGCTTGACACCACTGGTAACCTCGTTCTCGTGGATGGAGACATCACAGTGTGGACCTCAAACACCTCAGGTGCTGGCGTACAAGCAGCAGTCATGGCAGAATCCGGCAACTTCATCCTCCAGAACGCCACCAACCACCCTGTGTGGCAGAGTTTTTCTCAACCTTCCGACACTCTCCTCCCCAACCAGCTTCTAACAGTGTCTTCAGAACTAACTTCATCAAAGTCTTCTTCTCATGGTGGCTACTATTCTCTCAAAATGCTTCAACAGCGTACTTCATTAAGCCTTGCTCTCACTTACAATCTCCTCGAGACTTACCAGGCCTCAGATGAATCATACACCAACTATTCCTATTGGAAAGGCCCTGATATCTCCAATGTGACTGGGGAGGTTATAGCAGTTTTGGACCATGCTGGGAGCTTTGGGATTGTGTATGGAGACTCATCTGATGGTGCGGTGTATGTGTACAAGAATGATGGTGACGATGCAGGCTTGCCTTCTGCAGTTCATCAATCAACAGCATCGACTGTTCTCAGGAGATTGACACTGGAAAAGAATGGCAATCTGCGGTTGTATCGATGGGACGAAGTGAATGGCTCAAGGCAGTGGGTGCCACAGTGGGCTGCAGTTTCAAATCCATGTGACATTGCTGGAGTTTGTGGCAATGGGGTTTGCAATTTGGATAGAAGCAAGACAAAAGCCACTTGCACTTGCTTGCCAGGAACTTCTAAAGTTGGAAGGGATGGCCTGTGCTATGAGAATTCATCTCTTGTGGGAAAATGCAATGGCAGGCATGAAAACCAGACATCCCAGTTTAGGATTTCGACGGTGCAGCAAACCAACTATTATTTCTCTGACATTTCAGTTATAGCTAACTACAGTGATATTTCTAATGTGTCAAAATGTGGGGATGCTTGCTTGTCGGAATGTGATTGCGTGGCTTCTGTTTATGGGCTAAGTGAGGAGAGAGCGTATTGTTGGGTGTTGAGGAGCTTAAGTTATGGTGGTTTTGAGGATACAGGCTCAACTTTGTTTGTGAAGGTAAGAGCAAATGGGTCGTGGACTCCAGAAGGCCAAGAAGGAGGGTCTAGTAATAGCTCTTCTGATGGAATGGGAAGTGCAAAGGAGAAGGCTGTGATTATTCCCACTGTTGTGAGCATGGTAGTTCTCATTGTTTTGCTGAGTTTATTACTGTATTACAGTGTTCACAGGAAAAGAACTTTGAAAAGGGAGATGGAAAGTTCCTTGATCTTATCAGGTGCTCCAATGAATTTCACATATCGTGATTTGCAGATTAGGACATGCAACTTTTCACAGCTGCTAGGAACAGGTGGATTTGGGAGTGTATATAAAGGAAGCCTGGGTGATGGTACTCTGGTGGCAGTGAAGAAACTTGACAGGGTTTTGCCTCATGGAGAGAAGGAATTCATAACTGAAGTAAACACTATTGGCTCAATGCATCATATGAATTTGGTTCGCCTATGCGGCTATTGCTCTGAGGGATCACATAGGCTTCTGGTTTATGAGTTCATGAAGAATGGGTCCTTGGATAAGTGGATCTTCCCTTCGTATCAGGGGCGAGATAGACTGTTAGATTGGACAACTCGTTTCAATATAGCCATAGCTACTGCACAAGGGATTGCATACTTTCATGAGCAATGCAGGGATCGGATAATACACTGTGACATAAAACCAGAGAATATATTGGTGGACGAAAACTTTTGTCCTAAAGTGTCTGATTTTGGACTGGCGAAATTGATGGGAAGGGAGCACTCTCATGTGGTGACAATGGTGAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTGGTAATCGTCCTATAACTGTCAAAGCTGATGTTTACAGCTATGGGATGCTTCTTTTAGAGATCATTGGTGGTAGGAGAAATCTTGACATGTCCTTTGGCCCCGAGGATTTCTTCTATCCTGGTTGGGCTTACAAGGAGATGACAAATGGGGCAACAATTAAAGTGGCAGATAGAAGATTAAATGGGGCAGTTGATGAAGAAGAGCTAACGAGAGCTCTGAAAGTTGCATTTTGGTGCATCCAAGATGAGGTATCCATGCGACCAACAATGGGGGAAGTGGTGAAACTGCTGGAAGATTCGGTGGACATTAATATGCCACCGATGCCACAAACAGTGCTAGAGTTAATTGAGGAAGGCTTAGACCATGTATACAAAGCTATGAAAAGAGAGAATAATCACTCAAGCTCATTCACTCTTACCAGCCATCTCACGTCTCGTGCCACATGTAGCAATTCCACAATGTCACCTAGATAA 2595 0.4509 MANAPSSSFSCYCIILALGLFSFSTCISAHVALGSRLLSSKAQTWVSENGTFALGFTPADSDNRLFVLGVWFAQLPGDPTVVWSPNRDTPVSQDATLELDTTGNLVLVDGDITVWTSNTSGAGVQAAVMAESGNFILQNATNHPVWQSFSQPSDTLLPNQLLTVSSELTSSKSSSHGGYYSLKMLQQRTSLSLALTYNLLETYQASDESYTNYSYWKGPDISNVTGEVIAVLDHAGSFGIVYGDSSDGAVYVYKNDGDDAGLPSAVHQSTASTVLRRLTLEKNGNLRLYRWDEVNGSRQWVPQWAAVSNPCDIAGVCGNGVCNLDRSKTKATCTCLPGTSKVGRDGLCYENSSLVGKCNGRHENQTSQFRISTVQQTNYYFSDISVIANYSDISNVSKCGDACLSECDCVASVYGLSEERAYCWVLRSLSYGGFEDTGSTLFVKVRANGSWTPEGQEGGSSNSSSDGMGSAKEKAVIIPTVVSMVVLIVLLSLLLYYSVHRKRTLKREMESSLILSGAPMNFTYRDLQIRTCNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPSYQGRDRLLDWTTRFNIAIATAQGIAYFHEQCRDRIIHCDIKPENILVDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVGNRPITVKADVYSYGMLLLEIIGGRRNLDMSFGPEDFFYPGWAYKEMTNGATIKVADRRLNGAVDEEELTRALKVAFWCIQDEVSMRPTMGEVVKLLEDSVDINMPPMPQTVLELIEEGLDHVYKAMKRENNHSSSFTLTSHLTSRATCSNSTMSPR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03167 864 SMART serkin_6 532 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03167 864 Pfam S-locus glycoprotein domain 266 339 IPR000858 GO:0048544
Viun7g03167 864 CDD B_lectin 36 152 IPR001480 -
Viun7g03167 864 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Viun7g03167 864 FunFam Serine/threonine-protein kinase 32 150 - -
Viun7g03167 864 CDD STKc_IRAK 538 805 - -
Viun7g03167 864 SUPERFAMILY Protein kinase-like (PK-like) 510 804 IPR011009 -
Viun7g03167 864 Gene3D Phosphorylase Kinase; domain 1 496 607 - -
Viun7g03167 864 PANTHER OS07G0415500 PROTEIN 8 816 - -
Viun7g03167 864 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 167 IPR036426 -
Viun7g03167 864 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 608 814 - -
Viun7g03167 864 ProSitePatterns Protein kinases ATP-binding region signature. 538 561 IPR017441 GO:0005524
Viun7g03167 864 PIRSF SRK 2 859 IPR024171 GO:0004674
Viun7g03167 864 Pfam Protein kinase domain 535 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03167 864 SMART blect_4 36 152 IPR001480 -
Viun7g03167 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Viun7g03167 864 Pfam D-mannose binding lectin 80 167 IPR001480 -
Viun7g03167 864 Gene3D Transferase(Phosphotransferase) domain 1 608 819 - -
Viun7g03167 864 Gene3D - 31 151 IPR036426 -
Viun7g03167 864 ProSiteProfiles Protein kinase domain profile. 532 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03167 864 FunFam serine/threonine-protein kinase PBS1-like 500 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03167 Viun-Chr7 34258519 34263275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03167 503 814 Receptor kinase-like Gene Family AT5G20050 45.092 1.27e-78 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun7g03167 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03167 - - gmx:100794281 1541.94