Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03151 ATGCCTTGTTACTCTCCCCCACCACTTTTCTTCTTCTTCTTCTTCCTCTTCCCCTCCGTAGTTTCACTCCCTCTCTTCCCCTCCGACAACCTCACCCTCTACGGTGACGCCTTCTTCTCTCACAAAGCCATCACTCTCACCACCCACCAACCCACCTGCTCCTCCTCCTCCTCCATCGGCAGAGCCTTCTTCATCTACCCCCTCCGTTTTCTTGACCCCCAAACCAACTCCACCGCCTCCTTCTCCTCCCGCTTCTCCTTCTCCATCCTCTCCTCTCCCTCCTGCCCCTCCGGCGAAGGCCTCGCCTTCCTCATCGTCTCCTCCACCCACTTCCCCGCCATCTCCATGGGTCTCCCCCAACCCTCCCCCAGCTCAACCTCCTTCTTCGCCGTCGAGTTCGATACCACCTTCGACCCCTCCCTAGGCGACATCAACGACAACCACGTGGCCCTCGACGTCAACAGCGCCTCCTCCTTCGCGTCCGTCGACGCCTTCTCCCGCGGCATCGACCTCAAGAGTGGCAAACTCATCACTGCATGGGTGGAGTACCGTCACGCAATCAAGATGGTACGTGTCTGGCTCGCTTATTCCTTCACCAGACCTTCCATTCCCATTCTTGTTTCCCAAATAGACCTCTCTGAGAGACTTGAAGACTTCATGCACGTTGGTTTCACAGCCTCCAATGGGGAAGGGTCAAGTGATTACCTTGTTCATCATTGGCAGTTCACGACTTTCGGCCATGACTCTCGCTCCATGGACGTGATCGATGAAGGTGACTGTTTCTTGTGTTACGAAGGGGATTCCACGGGTTTTGGTCATGGTTCAAACATGAGAGAGATTGAGAGGAAGAAAAAGATTACGGAGTTGGCTCTTGGGTTGGGAGGGTTGACGGCGTTTGTGCTGTCGGTTTTGGCGGCGATGATTGTGGTGTGTGTTTTCTTGGCAAGGAAGAAAGGCGTTGTTCGGAAGAATATAGAGCAAAGGCGAAGTTGTGGGTTTGAGAGGAGTAAAGTTCCGACCAGGTTATCACTCTCGGAGATTAAGTCTGCCACAATGGGGTTCAATCGTGATAGGCTTGTTGGGGAGGGTGCATCTGCCAAGGTTTATAAAGGGTATCTTCCATTCGGAGGGGATGTAGCAGTGAAGAGATTTCAGAGGGAAAAGAACTTGAATTGTTTGCATAACCCTTTTGCCACTGAGTTTGCCACCATGGTGGGTTACCTGCGGCACAAGAATTTGGTTCAGCTTAAGGGGTGGTGCTGTGAGGGAAAAGAGTTGGTCCTGGTTTACGAGTATCTTCCCAATGGGAGTCTCAACAAGGTTCTACACAGGAACTTCAATTCTTCCATTGTTCTTTCGTGGAGGCAAAGGGAGAATATCGTTCTTGGGGTTGCTGCTGCTCTGACATACCTTCATGAAGAGTGTGAGAGGCAAATCATTCACAGGGATGTGAAGAGCTGCAACATAATGCTTGATGCCGATTTCAATGCAAAGCTTGGGGATTTTGGGCTTGCGGAAGTGTATGAGCACAGTTGCAGCACGAGGGAGGCTACTATACCAGCAGGGACAATGGGGTATCTTGCTCCTGAGTATGTTTATTCTGGTGTTCCTACTGTGAAGACCGATGTGTACAGCTTTGGGGTGGTGGTGTTGGAAGTGGGAACTGGAAGGAAACCTGTGGAAGATGATGGCAGTGTGATTGTGGATTATGTGTGGAGCTTGTGGGAAAAGGGGAAACTGATTGAGGGTGGTGATCCAAGATTGATGGGGAAATTTGATGCAGTGGATATGGAAAGGATGCTATTGGTGGGGCTTCTATGTGTGCACCCTGATGATGAGAAGAGGCCAACAGTAAGAGAAGCAGCAAGAATGCTTAAGAAGGAAGCACCACTTGCTGTTTTGCCTCCCATGAAACCAAGGTTGAGAATTAGGGCTATTTGTCCTCATCATCATGCTACTGCACCTGAAACACACCATGTTGATGGAGATTGCATCACCACAGATGAGGCTCCTTATTTGACCCCCAGAAGCCAGTTTAACTAG 2043 0.5076 MPCYSPPPLFFFFFFLFPSVVSLPLFPSDNLTLYGDAFFSHKAITLTTHQPTCSSSSSIGRAFFIYPLRFLDPQTNSTASFSSRFSFSILSSPSCPSGEGLAFLIVSSTHFPAISMGLPQPSPSSTSFFAVEFDTTFDPSLGDINDNHVALDVNSASSFASVDAFSRGIDLKSGKLITAWVEYRHAIKMVRVWLAYSFTRPSIPILVSQIDLSERLEDFMHVGFTASNGEGSSDYLVHHWQFTTFGHDSRSMDVIDEGDCFLCYEGDSTGFGHGSNMREIERKKKITELALGLGGLTAFVLSVLAAMIVVCVFLARKKGVVRKNIEQRRSCGFERSKVPTRLSLSEIKSATMGFNRDRLVGEGASAKVYKGYLPFGGDVAVKRFQREKNLNCLHNPFATEFATMVGYLRHKNLVQLKGWCCEGKELVLVYEYLPNGSLNKVLHRNFNSSIVLSWRQRENIVLGVAAALTYLHEECERQIIHRDVKSCNIMLDADFNAKLGDFGLAEVYEHSCSTREATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVGTGRKPVEDDGSVIVDYVWSLWEKGKLIEGGDPRLMGKFDAVDMERMLLVGLLCVHPDDEKRPTVREAARMLKKEAPLAVLPPMKPRLRIRAICPHHHATAPETHHVDGDCITTDEAPYLTPRSQFN 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03151 680 PANTHER - 49 635 - -
Viun7g03151 680 FunFam L-type lectin-domain containing receptor kinase S.6 321 432 - -
Viun7g03151 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 244 IPR013320 -
Viun7g03151 680 Gene3D Phosphorylase Kinase; domain 1 316 432 - -
Viun7g03151 680 CDD lectin_legume_LecRK_Arcelin_ConA 28 246 IPR001220 GO:0030246
Viun7g03151 680 FunFam L-type lectin-domain containing receptor kinase VIII.1 433 643 - -
Viun7g03151 680 Gene3D Transferase(Phosphotransferase) domain 1 433 631 - -
Viun7g03151 680 ProSiteProfiles Protein kinase domain profile. 354 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03151 680 Gene3D - 15 258 - -
Viun7g03151 680 Pfam Protein kinase domain 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03151 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Viun7g03151 680 Pfam Legume lectin domain 28 247 IPR001220 GO:0030246
Viun7g03151 680 SMART serkin_6 354 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03151 680 SUPERFAMILY Protein kinase-like (PK-like) 335 625 IPR011009 -
Viun7g03151 680 CDD STKc_IRAK 360 627 - -
Viun7g03151 680 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03151 Viun-Chr7 34154893 34156981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03151 9 680 Receptor kinase-like Gene Family AT5G42120 53.448 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun7g03151 Pkinase 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03151 - - gmx:100783805 988.793