Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03143 ATGCACTCTCTGGTTGATTCTCAGACACAGTATATGGAGAATTCAATGGAGAAGAACGTGGCAATGTTTTTTATTCCAACAACTCGTGCTACAGAGTTGTTGTCAACTGAGGTTAGTAGAGACAATGTCTCTGGAGGAAAAGAGAAGTTGCAGATAGATATTGAAGACAAGCTTGCCATCACCGAGTTCAATGGCGAGACACAACCCAATTTGGATTCAGTTATTTCTCACTATATTCAAAGTCTAAATCAGACCAACTTACGATTCTTGGGCTACCCCACTAATCAAAACTTCAACTATGACACATTAGCACCATTGCTTCATTTTCATTTGAACAACGTTGGTGATCCATTTCGAGGGAGCAGCTTCTCCATGAATTCAACATCATTTGAAGTTTGCGTGCTTGATTGGTTTGCAAATCTATGGGAGATAGAGAAGAGCAAGTACTGGGGATATGTCACAACAGGTGGAACCGAAGGGAATCTTCATGGGATTTTAGTAGGGAGAGAAAAATTTCCAAATGGGATTTTATACGCCTCACAAGATTCCCATTATTCAATCTTCAAAATTGCAAGAATGTATCGAATGCAATGCATGAAGGTTAGCACTTTGGTCTCTGGAGAGATTGATTGTGATGAACTAAAGACATTACTTCTTGCTCACAAGGACAAGCCAGCCATCATCAATCTTAACATCGGGACAACTATGAAAGGAGGGGTTGATGACCTTGATCTTGTAATAGAAATACTTAAGGAATGTGGTTTCACTCAAGACCGATTCTATATTCATTGTGATGGAGCTTTATTCGGAATCATGCTGCCTTTTATCAAACAAGCACCAAAGATCACTTTCAAGAAGCCCATTGGAAGTATAACTATTTCTGGCCATAAGTTTTTGGGATGTCCAATCCCATGTGGTACTCTAATAACTCGTCAACAATACATAAACGTGTTAACTGATGTTGAATACATTGCTTCAAGAGATGTTACAATCACAGGTAGTCGTTCTGGTCATGCATCAATTTTTCTTTGGTATGCCATCAAAAGAAAAGGTTTTATGGGACTTCAAAGCGAAGTGCATAAATGCATTGCGAATGCATGCCATCTACAACATCGATTACGAAGTGCTGGAATTGGTGCAATGTTAAACAAGTTTAGCAACATCGTTGTCTTCGAAAGACCACCAGACGAAGACTTTGCTCGTAAGTGGAGTTTGGCATGCGAGGGAAACATTGCACATGTTGTAGTGATGCAACATGTTACCACTGAAATGTTGGATTCCTTTGTTGACGAGTTTCTTCAAAAACGGTCCATTTGGTTTGAAGATGGACGATTTCTACCTCTATGCATTGCAAGTGACGTCGGTTCTAGACACTGTGCTTGTTCAATACACAATTCAATGCGGTGA 1407 0.398 MHSLVDSQTQYMENSMEKNVAMFFIPTTRATELLSTEVSRDNVSGGKEKLQIDIEDKLAITEFNGETQPNLDSVISHYIQSLNQTNLRFLGYPTNQNFNYDTLAPLLHFHLNNVGDPFRGSSFSMNSTSFEVCVLDWFANLWEIEKSKYWGYVTTGGTEGNLHGILVGREKFPNGILYASQDSHYSIFKIARMYRMQCMKVSTLVSGEIDCDELKTLLLAHKDKPAIINLNIGTTMKGGVDDLDLVIEILKECGFTQDRFYIHCDGALFGIMLPFIKQAPKITFKKPIGSITISGHKFLGCPIPCGTLITRQQYINVLTDVEYIASRDVTITGSRSGHASIFLWYAIKRKGFMGLQSEVHKCIANACHLQHRLRSAGIGAMLNKFSNIVVFERPPDEDFARKWSLACEGNIAHVVVMQHVTTEMLDSFVDEFLQKRSIWFEDGRFLPLCIASDVGSRHCACSIHNSMR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03143 468 SUPERFAMILY PLP-dependent transferases 78 433 IPR015424 -
Viun7g03143 468 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 290 311 IPR021115 GO:0016831
Viun7g03143 468 PANTHER - 47 465 - -
Viun7g03143 468 Gene3D - 112 374 IPR015421 GO:0003824
Viun7g03143 468 Pfam Pyridoxal-dependent decarboxylase conserved domain 127 377 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03143 Viun-Chr7 34030922 34034563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03143 232 373 Calmodulin-binding Proteins AT5G17330 27.632 5.40e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03143 K25193 - gmx:100781665 728.013