Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03142 ATGGCTCTCATTCCAGCACTTCATGCCACAGAGCTGTTGCCAAGAGTTGTGAGCACCGGCAAGTCCTCCATAAAAAAACAGAAGTTTCAAACAGATATTCAAGAGAAGCTTCAAACAGATATTGAAGGGAAGCTTGCCATCACTGAATACAGTGCCGAGTCACAACCCAATTTGGCTTCCATTATTTCTCACTACCTCCAGACTCTAAAACACTACAACTTACGCAACTTGGGGTATCCTACTAATCAGGATTTCAACTATGACCCATTACACCCGTTACTTGATTTTCACCTTAACAATGCTGGTGATCCATTTCTGGGCAGCAGTTTCTCCCTAAATTCAACAAGTTTTGAAGTTTGGGTGCTTAATTGGTTTGCAAGTATTTGGGAGATAGAGAAAAGTGAGTACTGGGGATATGTGACAAGTGGAGGAACCGAAGGAAATCTTCACGGGATTTTAGTAGGGAGAGAACAACTTCCTGATGGGATATTATACACCTCACAAGATTCACATTATTCAATCTTCAAAATAGCAATAATGTATCGAATGAAGTGTGTGAAGGTTAGAACATTAATCTCTGGTGAGATTGATTGTGCTGATCTGAAGGCTCAAGTTCTTGCACACAAGGAGAAGCCAGCCATCATCAATTTAAACATAGGGACGACTATGAAAGGAGGTATTGATGACCTTGATCTTGTAATACAAACTCTGGAGGACTGTGGCTTCACTCCTGATCGATATTATATTCACTGTGATGGAGCTCTGTCTGGAATTATGTTGCCTTTTCTCAAACAAGCACCAAGGATTACCTTTAAGAAACCAATTGGAAGTGTGACTATTTCTGGTCACAAGTTTTTGGGATGTCCATTTCCTTGTGGTATACTACTAACTCGTTTAGAATACATGAACGCAGTATCCAAAGATGTTGAAATTATTGCTTCAAGGGATGCCACGATCACAGGTAGCCGTAGCGGGCATGCTCCAATTTTTCTTTGGTACGCTTTAAAAAGAAGAGGTTTAGTAGGACTCCAGAATGAAGTGCAGAAATGCATAATGAATGCACAATACTTACAAAATCGATTACTTCATGCCGGAATCGGTGCAATGTTGAACAAATTTAGCAATGTCGTTGTCTTTGAAAGACCTTTAGATTATAACTTTTCCCGTAGGTGGAACTTGGCATGCAATGGTAATATTGCACATGTGGTAGTGATGCAACACATCACCGTTCAAATGTTAGACTCTTTTGTTCATGAATTTCTTCAAGAGCGATCCATTTGGTCTGAAGAAGGACGATTTCAACCTATATGCGTTGCAAATGATATTGGTGCTGCAAATTGTGCTTGTATATTGCACCATTCAATATCATGA 1371 0.399 MALIPALHATELLPRVVSTGKSSIKKQKFQTDIQEKLQTDIEGKLAITEYSAESQPNLASIISHYLQTLKHYNLRNLGYPTNQDFNYDPLHPLLDFHLNNAGDPFLGSSFSLNSTSFEVWVLNWFASIWEIEKSEYWGYVTSGGTEGNLHGILVGREQLPDGILYTSQDSHYSIFKIAIMYRMKCVKVRTLISGEIDCADLKAQVLAHKEKPAIINLNIGTTMKGGIDDLDLVIQTLEDCGFTPDRYYIHCDGALSGIMLPFLKQAPRITFKKPIGSVTISGHKFLGCPFPCGILLTRLEYMNAVSKDVEIIASRDATITGSRSGHAPIFLWYALKRRGLVGLQNEVQKCIMNAQYLQNRLLHAGIGAMLNKFSNVVVFERPLDYNFSRRWNLACNGNIAHVVVMQHITVQMLDSFVHEFLQERSIWSEEGRFQPICVANDIGAANCACILHHSIS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03142 456 Gene3D - 95 335 IPR015421 GO:0003824
Viun7g03142 456 Pfam Pyridoxal-dependent decarboxylase conserved domain 115 364 IPR002129 GO:0016830|GO:0019752|GO:0030170
Viun7g03142 456 PANTHER - 28 453 - -
Viun7g03142 456 Gene3D Aspartate Aminotransferase, domain 1 336 424 IPR015422 GO:0003824
Viun7g03142 456 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 277 298 IPR021115 GO:0016831
Viun7g03142 456 SUPERFAMILY PLP-dependent transferases 76 420 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03142 Viun-Chr7 34017957 34021288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03142 219 358 Calmodulin-binding Proteins AT1G65960 26.452 3.32e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03142 K25193 - gmx:100781665 699.123