Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03138 ATGGGGCGGAAGAAGCCGACTGCGAAGGACGAGGAGAACGCGTCACAGCAAGGCGGTGGCGGGAAATCCAAGAAGAAGGCCGTGGTCATCGACGACGATGAGTATTCCATTGGAACAGAGCTCTCTGAGGAGCCGGCTTTGGAAGAGAAACCTGCTGCGGCGGGAAAGAAGAAAGGTAAGAAAGGCAATGCTAAAAATAAGAGTAATGATGATGGTGTTGATGATGACGAGGATGTGCCTGAAGTTGTGTTTGCTGGGAAGAAGAAGGGGAAAAACAAGAAGGGCGGTGGGAGCAGTGGGTTTACTGCATCTGGCTTTAGTTTGCTTGGTGATGAGGAAGGTGATGAAGAAGATAAGTCTGAAGAGGATGGACCTGCGGTTAGTTTTTCGGGTAAGAAGGCATCGAACAAAGGAGGTGGTAGTTTGTTCAATGCATCAGCTTTTGATGCTATCGACGATGATGCTGGTGGTGAGGAGCAGGAGGATGAGCCGGTGGTTAGCTTTACTGGAAAGAAAAAGTCCTCGAAGGGTTCGAAGAAAAGCGGTGGTAGTTTGTTCTCTGCCTCAGCTTTTGATGCTATTGATGATGGTGGGGATGGTGAGGTGGCAGATGATAAGAATAACGATTTTGATGACGATGAACCTGTTATTACTTTCACGGGGAAGAAGAAGTCTTCGAAAGGCAGTAAGAAGGGTGGTGCTGTGTTTTCAGCCTCTGTTCTCACTGAAATCGATGACGGAGAGGAGAAGGAAGATGGTGGTGGTGATGATGACGATGACATTGGACCAATTACTTTCTCTGGCAAGAAGAAGAAGTCTTCCAAGAAAGCTGCAAGTTCCGGTGGCAAAGCTGTTTCTGTTGAGGATGATGTTTCTGTACCCGAGTCTGGTAAGGATGGTGATGACATGGATGAGGATGATGTTTCTTTAGTTTCGTTTTCAGGTAAAAAGAAGTCCTCTAAAAAGAAGGGCAGTAGCACTGCTGCCAAAGGGAGTGAGGAAAATGTGGATGTAGTTGAGCCTGAGGCACCCACGAAGAGTGCTGATGCTAGCAACAGCAATGTAAATAAGAGTGAAGGAGTTGCTGAAACTTCCAAAAATAAGAAGAAGAATAAGAAAAAGAGTGGAAGAACTGCTCAAGAGGAGGAAGATTTGGATAAGCTTCTTGCAGAGCTCGGTGAGGCTCCTATACCAAAACCAACTGCTTCTGCACCACAGGATGATAAAGTTCAGCCTACTCCTGAAGTAGGTCCTGCTGCTGCTGATGCTTCTGGGGAAAAGGAGGGTGAAGAGGAGGTGGTAGAGTCAGCTGCTGCAAAGAAGAAGAAGAAGAAAAAAGAAAAGGAAAAGGAGAAGAAGGCAGCTGCCGCTGCCGCAGCAGCAGCAGGAAGTGCACCAGAAAAAGAATCAGTAGAAGTTAAGGCTGAGGTAATTGAACCAAAGAAGAATGACTCAAAGGCTAAGGCAGCTGATAAGAAAGTGCCAAAGCATGTTAGAGAGATGCAAGAGGCACTAGCTCGAAGAAAAGAGGCAGAAGAAAAGAAGAAAAGAGAAGAGGAAGAAAAGTTAAAGAAGGAAGAAGAGGAGCGACGCAGGCAAGAGGAACTTGAGAGACAGGCAGAAGAAGCTAAACGTAGAAAGAAGGAAAGAGAAAAGGAAAAACTTCTGAAAAAAAAGCAAGAAGGTAAACTGTTAACTGGTAAGCAGAAGGAAGAAGCCCGTCGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACTGGGGGTCTGACTCTCCCTTCTGGGGACTCTGGTGCTCCAGCTAAAAAACCCATATACCAGACAAAGAAGGCAAAACCAAATAATAGAAATCAGAATGGTGCTGCTGCTCAGGCAGCTGACATTGTTGAAGCGAAGGAGACTACTACTGATGTAGTTTCTGAGGAACCTGTAAATATTGAAGAAGTGGAGTCGATTCAGGTGGATGATAAAATTGAACTTCCTGTCACTGCTGAAAATGATGTGGTGGAAGATGATGAAGATGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTAAATGCCAAAGGTGCATTTGCAGATGAAGAGGCTGACTCCGAACCTAAACCTGTCATCAAAAAGGAGATTAAAAATGCCGTGCCTACTCAGAACGCCGGGGCTGCTAGTTCAACTGTTTCTGGGTCTGTGACTGATGAAACTGAAAATGCAAAGCAAGCTAATGCTGTGGTTACAGACAGAAATAAGAAACACGATTCTGACTTGAATAGGTCAAAAAAATCTGCTGCCCCTCCTCAGCCTAATGATGAAAACCTCCGCTCCCCAATTTGCTGTATCATGGGGCACGTGGATACTGGCAAGACCAAGCTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAGGGTGAGGCTGGAGGTATCACACAACAGATTGGTGCAACATACTTTCCTGCTGAGAACATACGCGAAAGAACGAAGGAACTGAAAGCTGATGCCAAGCTGAAAGTTCCTGGTCTACTGGTTATTGACACCCCTGGGCACGAGTCATTTACTAATTTGAGGTCTCGGGGTTCAGGCCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGGTTAGAGCCGCAGACAATAGAGTCACTAAATCTATTAAAAATGAGGAATACAGAATTTATTGTTGCCTTAAATAAGGTTGACAGGCTTTATGGCTGGAAAACATGTCGCAATTCCCCAATTGTCAAAGCACTGAAGCAGCAGACTAAGGATGTTCAAAATGAGTTCAATATGAGGCTCACTCAGATTGTTACTCAATTCAAAGAACAAGGGATGAATACTGAGTTGTACTATAAAAACAAAGAAATGGGAGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATTCCCGATTTATTATTACTATTGGTTCAATGGACCCAAAAAACAATGGTTGAGAAACTTACATACAGTGAAGAAGTACAGTGTACTGTTTTAGAGGTTAAGGTTGTTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGAACAAATAGTTGTCTGCGGAATGCAGGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTCAAGGGAACATATCTTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAAATCACTGCCCAGGGCCTTGAGCATGCCATTGCTGGCACTGGTTTATATGTGGTGAAGCCTGATGATGATTTGGAAGATATCAAAGAAGCAGCAATGGAAGATATGCGATCAGTCATGAGCAGGATTGACAGGACTGGTGAAGGTGTTTGTGTACAGGCATCTACCCTTGGTTCCTTAGAAGCATTACTGGAGTTTTTGAAAACTCCAGAAGTTAGTATCCCTGTTAGTGGTATAAGCATTGGTCCTGTGCACAAAAAAGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGAAGCGAGAGTATGCAACTATATTGGCATTTGATGTCAAAGTTACACCTGAGGCTAGGGAACTGGCAGATGAATTGGGTGTGAAGATATTTATTGCTGATATCATTTATCATCTGTTTGATCAATTTAAAGCTTATATTGACAACATTAAAGAAGAGAAAAAGAAAGAAGCTGCTGATGAGGCAGTCTTCCCATGCGTTTTTAAAATCTTACCAAATTGCATTTTCAACAAGAAGGACCCAATTGTTTTGGGAGTTGATATTCTTGAAGGCATTGCAAAGATTGGGACTCCAATTTGCATTCCTTCCAGAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAAAATAACCACAAACCTGTTGATTATGCCAAGAAGGGCCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATCCTGAAGAGCAACAAAAAATGTTTGGGAGACATTTTGAGATCGACGATGAACTTGTAAGCCATATTTCACGGAGATCTATTGATATTCTCAAAGCTAATTATCGGGATGATCTATCTATGGAGGAATGGAGGTTGGTTGTGAAATTGAAGAATCTTTTCAAGATACAGTGA 4095 0.4313 MGRKKPTAKDEENASQQGGGGKSKKKAVVIDDDEYSIGTELSEEPALEEKPAAAGKKKGKKGNAKNKSNDDGVDDDEDVPEVVFAGKKKGKNKKGGGSSGFTASGFSLLGDEEGDEEDKSEEDGPAVSFSGKKASNKGGGSLFNASAFDAIDDDAGGEEQEDEPVVSFTGKKKSSKGSKKSGGSLFSASAFDAIDDGGDGEVADDKNNDFDDDEPVITFTGKKKSSKGSKKGGAVFSASVLTEIDDGEEKEDGGGDDDDDIGPITFSGKKKKSSKKAASSGGKAVSVEDDVSVPESGKDGDDMDEDDVSLVSFSGKKKSSKKKGSSTAAKGSEENVDVVEPEAPTKSADASNSNVNKSEGVAETSKNKKKNKKKSGRTAQEEEDLDKLLAELGEAPIPKPTASAPQDDKVQPTPEVGPAAADASGEKEGEEEVVESAAAKKKKKKKEKEKEKKAAAAAAAAAGSAPEKESVEVKAEVIEPKKNDSKAKAADKKVPKHVREMQEALARRKEAEEKKKREEEEKLKKEEEERRRQEELERQAEEAKRRKKEREKEKLLKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGLTLPSGDSGAPAKKPIYQTKKAKPNNRNQNGAAAQAADIVEAKETTTDVVSEEPVNIEEVESIQVDDKIELPVTAENDVVEDDEDDEWDAKSWDDVNLNAKGAFADEEADSEPKPVIKKEIKNAVPTQNAGAASSTVSGSVTDETENAKQANAVVTDRNKKHDSDLNRSKKSAAPPQPNDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNSPIVKALKQQTKDVQNEFNMRLTQIVTQFKEQGMNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSEEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGEQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLEDIKEAAMEDMRSVMSRIDRTGEGVCVQASTLGSLEALLEFLKTPEVSIPVSGISIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVFKILPNCIFNKKDPIVLGVDILEGIAKIGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNPEEQQKMFGRHFEIDDELVSHISRRSIDILKANYRDDLSMEEWRLVVKLKNLFKIQ 1364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03138 1364 FunFam Eukaryotic translation initiation factor 5B 766 994 - -
Viun7g03138 1364 MobiDBLite consensus disorder prediction 716 771 - -
Viun7g03138 1364 PRINTS GTP-binding elongation factor signature 892 901 IPR000795 GO:0003924|GO:0005525
Viun7g03138 1364 PRINTS GTP-binding elongation factor signature 856 867 IPR000795 GO:0003924|GO:0005525
Viun7g03138 1364 PRINTS GTP-binding elongation factor signature 776 789 IPR000795 GO:0003924|GO:0005525
Viun7g03138 1364 PRINTS GTP-binding elongation factor signature 840 850 IPR000795 GO:0003924|GO:0005525
Viun7g03138 1364 FunFam Eukaryotic translation initiation factor 5B 1227 1364 - -
Viun7g03138 1364 MobiDBLite consensus disorder prediction 469 572 - -
Viun7g03138 1364 Pfam Elongation factor Tu GTP binding domain 776 984 IPR000795 GO:0003924|GO:0005525
Viun7g03138 1364 MobiDBLite consensus disorder prediction 346 361 - -
Viun7g03138 1364 Coils Coil 494 561 - -
Viun7g03138 1364 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 472 1361 IPR015760 -
Viun7g03138 1364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 772 1063 IPR027417 -
Viun7g03138 1364 Gene3D Translation factors 995 1115 - -
Viun7g03138 1364 MobiDBLite consensus disorder prediction 665 680 - -
Viun7g03138 1364 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1097 1226 IPR036925 -
Viun7g03138 1364 FunFam eukaryotic translation initiation factor 5B 995 1114 - -
Viun7g03138 1364 MobiDBLite consensus disorder prediction 585 624 - -
Viun7g03138 1364 CDD IF2_eIF5B 775 985 - -
Viun7g03138 1364 Gene3D - 766 994 IPR027417 -
Viun7g03138 1364 MobiDBLite consensus disorder prediction 245 259 - -
Viun7g03138 1364 Pfam Translation-initiation factor 2 1101 1213 IPR023115 -
Viun7g03138 1364 Pfam Elongation factor Tu domain 2 1011 1086 IPR004161 GO:0005525
Viun7g03138 1364 MobiDBLite consensus disorder prediction 424 442 - -
Viun7g03138 1364 MobiDBLite consensus disorder prediction 716 743 - -
Viun7g03138 1364 CDD aeIF5B_II 996 1106 - -
Viun7g03138 1364 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 772 988 IPR000795 GO:0003924|GO:0005525
Viun7g03138 1364 NCBIfam small GTP-binding protein domain 777 903 IPR005225 GO:0005525
Viun7g03138 1364 MobiDBLite consensus disorder prediction 375 390 - -
Viun7g03138 1364 Gene3D - 1116 1220 IPR036925 -
Viun7g03138 1364 Gene3D Translation factors 1227 1364 - -
Viun7g03138 1364 FunFam Eukaryotic translation initiation factor 5B 1114 1220 - -
Viun7g03138 1364 CDD IF2_aeIF5B_IV 1235 1330 - -
Viun7g03138 1364 MobiDBLite consensus disorder prediction 744 758 - -
Viun7g03138 1364 Coils Coil 427 459 - -
Viun7g03138 1364 MobiDBLite consensus disorder prediction 1 572 - -
Viun7g03138 1364 MobiDBLite consensus disorder prediction 663 683 - -
Viun7g03138 1364 SUPERFAMILY Translation proteins 1231 1363 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03138 Viun-Chr7 33983313 33991476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03138 1 219 Eukaryotic Initiation Factors Gene Family AT1G76810 38.618 1.84e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03138 K03243 - gmx:100814875 1755.34