Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03133 ATGCTCGGGGACTCAGCTGTGTTGGGAGCGGGAGGCGGAAGTGGCGGCGGGGAAGGTGGCGCCTCCGCCGATGCAGTGGCCGGGGTGACGCATGAGCGGGCGGTGGCAGCGAGCGGAGGCGGTGGCGGAGTTGGATCAAATTCAGGGGACGACGAAAGGGGTAGAATCGAAGAGGGAGAACGTAGCTTCGGTGGTAACCGGTGGCCCCGACAAGAGACTTTGGCGCTGTTAAGGATACGGTCGGATATGGACGTGGCGTTTCGAGATGCAAGTGTTAAGGGTCCTTTGTGGGAAGAAGTATCCAGGAAAATGGCAGAGCTTGGGTATCACAGAAGTTCCAAGAAGTGCAAAGAGAAATTCGAGAACGTGTACAAGTACCACAAGAGAACCAAAGAAGGTCGAAGTGGGAAGCAAGATGGAAAAACATATCGTTTCTTCGATCAACTACAAGCCCTTGAGAATCACACTCCAACACCCCACTCTCCCAACCCATCACCAAAACCACCACAATCAGCGCCATCAAGAGTAATTGCAGCAACAGCTGCATCAGTGTCACTACCAATTGCAACAGCAGCAACAACTGCTTCATCGTTGCCACTTCCAATTCCAACCACAATAACAACAGTGCCAATGCAGCCAATACTGTCCAACACCACTCTCACCAGTACTGTCCCCCATATCACTGTTCCATCAACAACAACACTCCCCATAACCATACCCCAGCCCATGCTCACTACCCCATCAATACATCTCTCAACTCCTTCTTTCCCTCCAACAAACCCTACCACCAACACAACCCCACCACCCTCTTTCCCCTCGCTCCCCACCGACACCTTCTCCAATTCTAGCTCCTCCTCCACCTCCTCCGACGAAACATTGGAAGGTAGGCGCAAGAGAAAGCGCAAGTGGAAGGACTTCTTCGAGAGACTCATGAAGGAAGTCATCCAGAAACAAGAGGATCTACAAAAGAAGTTCCTCGAAGCCATAGAGAAACGAGAACACGAAAGAATAGCAAGAGAAGAAGCGTGGAGGGTCCAAGAGATGCAAAGAATCAATAGAGAAAGAGAAATCCTCGCACAGGAAAGATCCATAGCCGCAGCCAAAGACGCTGCCGTCATGTCATTCCTTCAAAAGGTAGCCGAACAACAAAACCTCGGTCAAGCATTGAACACCATCAACCTCGTACAACAACCATCACAGCAACAACCTCAACCACCACTGCAACAACTACCACCGTCTAGTGTAGCGCCGTCTCCCGTGCAACAACCACTGCCCGCGGTTGTTCCACAGCCAGTGGTGTTTCCAGTGGTCTCACAAGTGACCAACATGGAGATAGTGAAAGTTGACAACAACAACAACAACAATAATAGTAGGGATAATTTCACGCCATCGAGTTCCTCAAGGTGGCCAAAGGTGGAGGTTCAGGCATTGATAAAGCTTCGAACGAACCTGGATGCAAAGTATCAGGAGAACGGACCAAAGGGTCCTCTCTGGGAGGAGATCTCATCCTCAATGAGGAAGCTCGGGTACAACCGAAACGCGAAAAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTATTTCAAGAAGGTGAAGGAAAGCAACAAGCGGAGACCGGAAGATTCAAAAACGTGCCCTTACTTCCACCAGCTGGACGCGCTGTACAGGGAGAAGGGGAAGGTGGAGGGCGTGGCGGCGGCGGTGAAGCCGGAAAGCACGGTGGCACCGCTGATGGTGCGGCCGGAGCAGCAATGGCCACCTCAGGAGGAAACGATGAGGGATAGGGACATCAGAATGGAGGACGTGGAGAACGAAGAGGATGAGTACGAGGAAGAGAGAGAGGGAGAGGGAGAGGGAGAGGACGAAGAAGATGATGAAGAGGATGAAGAAGGTGGTGGTGGTGGTGGGAAATATGAGATAGTGGCGAACAAAACGAGTGGTGGTTCAGTTGCGGCATCAACAGAATAG 1968 0.5173 MLGDSAVLGAGGGSGGGEGGASADAVAGVTHERAVAASGGGGGVGSNSGDDERGRIEEGERSFGGNRWPRQETLALLRIRSDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKQDGKTYRFFDQLQALENHTPTPHSPNPSPKPPQSAPSRVIAATAASVSLPIATAATTASSLPLPIPTTITTVPMQPILSNTTLTSTVPHITVPSTTTLPITIPQPMLTTPSIHLSTPSFPPTNPTTNTTPPPSFPSLPTDTFSNSSSSSTSSDETLEGRRKRKRKWKDFFERLMKEVIQKQEDLQKKFLEAIEKREHERIAREEAWRVQEMQRINREREILAQERSIAAAKDAAVMSFLQKVAEQQNLGQALNTINLVQQPSQQQPQPPLQQLPPSSVAPSPVQQPLPAVVPQPVVFPVVSQVTNMEIVKVDNNNNNNNSRDNFTPSSSSRWPKVEVQALIKLRTNLDAKYQENGPKGPLWEEISSSMRKLGYNRNAKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYREKGKVEGVAAAVKPESTVAPLMVRPEQQWPPQEETMRDRDIRMEDVENEEDEYEEEREGEGEGEDEEDDEEDEEGGGGGGKYEIVANKTSGGSVAASTE 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03133 655 MobiDBLite consensus disorder prediction 238 259 - -
Viun7g03133 655 SMART sant 64 126 IPR001005 -
Viun7g03133 655 SMART sant 465 527 IPR001005 -
Viun7g03133 655 MobiDBLite consensus disorder prediction 397 422 - -
Viun7g03133 655 ProSiteProfiles Myb-like domain profile. 467 525 IPR001005 -
Viun7g03133 655 MobiDBLite consensus disorder prediction 154 175 - -
Viun7g03133 655 FunFam Trihelix transcription factor GT-2 469 530 - -
Viun7g03133 655 Coils Coil 592 619 - -
Viun7g03133 655 MobiDBLite consensus disorder prediction 275 290 - -
Viun7g03133 655 MobiDBLite consensus disorder prediction 238 299 - -
Viun7g03133 655 CDD GT1 467 532 - -
Viun7g03133 655 Pfam Myb/SANT-like DNA-binding domain 467 554 IPR044822 -
Viun7g03133 655 Pfam Myb/SANT-like DNA-binding domain 66 152 IPR044822 -
Viun7g03133 655 ProSiteProfiles Myb-like domain profile. 66 124 IPR001005 -
Viun7g03133 655 MobiDBLite consensus disorder prediction 404 422 - -
Viun7g03133 655 Coils Coil 304 324 - -
Viun7g03133 655 CDD GT1 66 131 - -
Viun7g03133 655 MobiDBLite consensus disorder prediction 579 655 - -
Viun7g03133 655 MobiDBLite consensus disorder prediction 260 274 - -
Viun7g03133 655 FunFam Trihelix transcription factor GT-2 68 129 - -
Viun7g03133 655 MobiDBLite consensus disorder prediction 50 65 - -
Viun7g03133 655 MobiDBLite consensus disorder prediction 601 632 - -
Viun7g03133 655 PANTHER FI21293P1 45 605 - -
Viun7g03133 655 MobiDBLite consensus disorder prediction 1 67 - -
Viun7g03133 655 Gene3D - 68 129 - -
Viun7g03133 655 Gene3D - 469 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03133 Viun-Chr7 33918326 33921763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03133 57 585 Trihelix Transcription Factor Family AT1G76880 52.803 1.24e-163 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun7g03133 Myb_DNA-bind_4 2.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03133 - - pvu:PHAVU_007G079700g 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01849 4 33179385 33183023 Viun7g03133 7 33918326 33921763 PCT