Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03132 ATGCAGCTTGGAGACAACACAGCCATGGAAACCTCCTCCGGTGAGGCTGTGGCGGCGCATGACGGTGGCGAGGTGATTATGATGGATGCAACTTCCGGTGAAGAGAAGGGAAAAGAGGGTGGCTTAGAAGAAGAAGAAGGTGACAAGATCAACAGCTCATGTGCTGGGAACAGATGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCGGATATGGATGCTGTATTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAAGTTGCAAGGAAACTAGCAGAACTGGGTTACCACCGAAGCGCGAAGAAATGTAAGGAGAAATTCGAGAATGTGTACAAGTACCACAAAAGAACCAAAGAGAGTAGAAGCGGGAAACAAGAGGGTAAAACCTACAAATTTTTTGATCAATTACAAGCCCTTGAGAACCAATTCATTGTCTCTTACCCGTTAAAACCACAACCCACTTTGGCAACAACAAACACGGTTGCATTATTACCTCCCCCAACAAGGCCTAGTGATACAACAACAATCTCTTATGTCACCGCCACTGTTCCCTCCACAAACCCTACAGCAATATCTCCATCACCACCTCCACCACCACCACCACCAACCAATGCCACCACGACAACCACCATCACTTCTCCAACAGTGCAAACCAACCCTAGAAACCCTCCACAACCCAACAACAATAACCATGACATCCCTTACACTTTGCCTAACATGAACAACCTCTTCTCCACCACTTCAACCTCTTCTTCCACCGCCTCTGATGAAGACTTGGAAGAGAAGTACCGGAAGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTCACAAGGCAGGTTTTGGCCAAGCAAGAGGAAATGCAAAAGAGGTTCCTGGAAGCCATAGACAAAAGGGAGAGAGAACACGTGGCACAGCAAGAGGCTTGGAGGATCCAAGAAATGGCAAGGATCAACAGAGAACACGAACTTCTTGTCCAAGAAAGATCAACCGCAGCAGCCAAAAATGCAGCGGTTATTGCCTTTTTGCAACAGTTATCTGGTCAGAACCAGAACCCCTCAACACAAGCCGGTGCCAATTTTCTTCAAACACCGCCGCCTTCACAACCACCACCTCCACCCCAAGTATCACAACTAAAACCACCATCCCAACAAGCACCATTGGTGATGTCAAATAATAACAACATCGAAATTCAGAAAATGAATAATGGTCACAGTGCAGTTGCTGCTACTCCTACAACTGCTGCTACTGCTATTTGCGTTGTTGCTACGACTCCCACTTCATTGAACTCCTTATCTTCTTCTAGGTGGCCAAAAGCTGAAGTTCTTGCTTTGATAAGGTTGAGGACGAGTCTTGAAACCAAGTACCAAGAAAATGGACCAAAGGCTCCACTATGGGAGGACATATCAGCAGGAATGTTGAGGCTCGGGTACAACAGGAGTGCGAAGAGATGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAAAGCAACAAGCACAGGCGCGAGAATAGTAAGACATGTCCGTATTTTCACGAACTGGATGCCATATACAGAGAAAAGAGCAAAAGTCAGAACCCCTTTGGCGCTTCATTCCTGAACATGAAGGCACATGAGATGATGGAGCCCTTGATGGTGCAACCGGAGCAGCAGTGGCGACCTCCGTCCCAATACGAGCAAGGTGCAGCGAAGGAGAACAGTGAGAGTGAATACGAAAGAAAAGAGAGAGAGGAGGAAGAGGAAGAGGATGATGAAGAAGAAGTAGAAGAGGATGAGAATGAAGAGGGGGATCTGGAGAGTGTGGAAGATGAAGGAGGGAACCGTTATGAGATTGCGACAAATAAACTTTCTTCGGTGGACACAGTTGAATGA 1896 0.4694 MQLGDNTAMETSSGEAVAAHDGGEVIMMDATSGEEKGKEGGLEEEEGDKINSSCAGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVARKLAELGYHRSAKKCKEKFENVYKYHKRTKESRSGKQEGKTYKFFDQLQALENQFIVSYPLKPQPTLATTNTVALLPPPTRPSDTTTISYVTATVPSTNPTAISPSPPPPPPPPTNATTTTTITSPTVQTNPRNPPQPNNNNHDIPYTLPNMNNLFSTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKRFLEAIDKREREHVAQQEAWRIQEMARINREHELLVQERSTAAAKNAAVIAFLQQLSGQNQNPSTQAGANFLQTPPPSQPPPPPQVSQLKPPSQQAPLVMSNNNNIEIQKMNNGHSAVAATPTTAATAICVVATTPTSLNSLSSSRWPKAEVLALIRLRTSLETKYQENGPKAPLWEDISAGMLRLGYNRSAKRCKEKWENINKYFKKVKESNKHRRENSKTCPYFHELDAIYREKSKSQNPFGASFLNMKAHEMMEPLMVQPEQQWRPPSQYEQGAAKENSESEYERKEREEEEEEDDEEEVEEDENEEGDLESVEDEGGNRYEIATNKLSSVDTVE 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03132 631 MobiDBLite consensus disorder prediction 210 258 - -
Viun7g03132 631 MobiDBLite consensus disorder prediction 367 383 - -
Viun7g03132 631 CDD GT1 438 503 - -
Viun7g03132 631 MobiDBLite consensus disorder prediction 31 51 - -
Viun7g03132 631 Coils Coil 570 603 - -
Viun7g03132 631 CDD GT1 57 122 - -
Viun7g03132 631 MobiDBLite consensus disorder prediction 193 209 - -
Viun7g03132 631 Gene3D - 59 120 - -
Viun7g03132 631 Gene3D - 440 501 - -
Viun7g03132 631 MobiDBLite consensus disorder prediction 557 631 - -
Viun7g03132 631 MobiDBLite consensus disorder prediction 1 56 - -
Viun7g03132 631 FunFam Trihelix transcription factor GT-2 440 501 - -
Viun7g03132 631 MobiDBLite consensus disorder prediction 353 389 - -
Viun7g03132 631 Pfam Myb/SANT-like DNA-binding domain 438 525 IPR044822 -
Viun7g03132 631 Pfam Myb/SANT-like DNA-binding domain 57 143 IPR044822 -
Viun7g03132 631 MobiDBLite consensus disorder prediction 558 572 - -
Viun7g03132 631 MobiDBLite consensus disorder prediction 188 266 - -
Viun7g03132 631 FunFam Trihelix transcription factor GT-2 59 120 - -
Viun7g03132 631 SMART sant 55 117 IPR001005 -
Viun7g03132 631 SMART sant 436 498 IPR001005 -
Viun7g03132 631 PANTHER FI21293P1 32 586 - -
Viun7g03132 631 ProSiteProfiles Myb-like domain profile. 432 496 IPR001005 -
Viun7g03132 631 ProSiteProfiles Myb-like domain profile. 51 115 IPR001005 -
Viun7g03132 631 MobiDBLite consensus disorder prediction 582 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03132 Viun-Chr7 33897658 33901095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03132 55 560 Trihelix Transcription Factor Family AT1G76880 47.238 4.85e-137 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun7g03132 Myb_DNA-bind_4 7.7e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03132 - - gmx:100799041 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01848 4 33135072 33138005 Viun7g03132 7 33897658 33901095 PCT