Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03101 ATGTCTCACAGGAAGTTCGAACACCCAAGGCACGGGTCTCTGGGATTTCTCCCCAGGAAGCGTGCTTCTCGTCACAGGGGAAAAGTGAAGGCATTCCCTAAGGATGATCCATCCAAGTCACCCAAGTTGACTGCATTCTTGGGTTACAAGGCTGGTATGACTCACATTGTTAGAGAGGTCGAGAAGCCAGGATCAAAGCTTCACAAGAAGGAAACTTGTGAGCCTGTTACAATCATTGAGACCCCTCCAATGGTTGTTGTTGGTGTCGTGGGTTATGTGAAAACTCCACGTGGTCTTCGAACCTTGAACACCGTCTGGGCTCAGCACTTGAGCGAGGAACTGAAGCGTAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACCAAGTACTCAAAGCAGTACGAGACTGACGAGGGGAAGAAGAACATTGAGACTCAGCTGGAGAAACTAAAGAAGTATGCTACTGTGATTCGTGTTTTGGCTCACACCCAGATCAGGAAAATGAAAGGTTTGAAGCAGAAGAAAGCCCATATCATGGAAATTCAGGTTAACGGTGGTTCTATTGCACAGAAGGTGGACTTTGCGTACAGTTTCTTTGAGAAACAGGTCCCTATTGATGCTGTGTTCCAGAAAGATGAGATGATTGACATCATAGGAGTGACAAAGGGTAAGGGTTATGAGGGTGTTGTAACTCGTTGGGGTGTTACTCGTCTTCCCCGTAAGACTCACAGGGGTTTGAGGAAGGTGGCTTGTATTGGTGCCTGGCATCCTGCCAGAGTTTCATTCACTGTTGCCAGGGCTGGTCAGAATGGATACCACCACAGGACTGAGTTGAACAAGAAGGTTTATAAGCTTGGTAAAGCTGGGGACGAGTCTCACACTGCTCTTACCGAGTTCGATAGGACTGAGAAAGACATTACCCCCATGGGTGGTTTCCCTCACTATGGTATTGTGAAGGACGATTTCATCATGGTGAAAGGATGCTGTGTTGGGCCCAAGAAAAGGGTTCTTACATTGCGCCAGTCCCTGCTTAAGCAGACTTCTCGTGTCGCCCTTGAGGAGATCAAGCTCAAGTTTATCGATACCTCCTCAAAGTTCGGACACGGTCGCTTCCAGACCACACAGGAGAAGCAGAAGTTCTTTGGACGCCTCAAGGCATAA 1170 0.4795 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKSPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYKNWCKSKKKAFTKYSKQYETDEGKKNIETQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGSIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHTALTEFDRTEKDITPMGGFPHYGIVKDDFIMVKGCCVGPKKRVLTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03101 389 ProSitePatterns Ribosomal protein L3 signature. 212 235 IPR019926 -
Viun7g03101 389 Gene3D - 83 207 - -
Viun7g03101 389 FunFam 60S ribosomal protein L3 1 74 - -
Viun7g03101 389 FunFam 60S ribosomal protein L3 44 159 - -
Viun7g03101 389 FunFam Ribosomal protein L3 265 389 - -
Viun7g03101 389 Pfam Ribosomal protein L3 1 370 IPR000597 GO:0003735|GO:0005840|GO:0006412
Viun7g03101 389 SUPERFAMILY Translation proteins 4 370 IPR009000 -
Viun7g03101 389 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 384 IPR045077 GO:0003735|GO:0005840|GO:0006412
Viun7g03101 389 MobiDBLite consensus disorder prediction 1 38 - -
Viun7g03101 389 FunFam 60S ribosomal protein L3 83 207 - -
Viun7g03101 389 Gene3D Translation factors 44 385 - -
Viun7g03101 389 Gene3D Ribosomal protein L3, domain 3 1 274 IPR044892 -
Viun7g03101 389 FunFam 60S ribosomal protein L3 226 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03101 Viun-Chr7 33616728 33619706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03101 1 387 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 86.305 0.0 697
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03101 7 33616728 33619706 Viun7g03101 7 33616728 33619706 ECH