Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03092 ATGATGTCACGTTTTATGCATGCGCCTTCTCCGGGTTTGTCTTCTTCTCCTGGGCCTCCTCTCTTGGGCTCGGGCTCGGGCTCGGGCTCGGTTGGGCAGAAAAGAGCGCGTGAAGATGACACTGGTGCTGCCGCGAGTGGGGGTGAGGGTGCTTCGTCACAGAGTGCGTCACGGGAAGAAAGCGGCGAGAGGAGGAGGAGATACAGAGGGGTGAGGCAGAGACCGTGGGGGAAATGGGCGGCGGAGATTCGCGATCCTCAAAAAGCGGCGAGAGTGTGGCTCGGCACCTTCGACACCGCCGAGGCTGCTGCCAGAGCCTACGATGAAGCCGCATTGAGGTTCAGAGGTAACAGAGCCAAACTCAACTTCCCAGAAAACGTTACCGCGGTGCGACCTCCTCACCTTCCCGATTTTCCGGCCACCTCACTCGCAGGCTCCGGTGATGTTCCCGCGGTGACCGGTTATTCTCCGACGGTGATGCAGGGGGCGCCGTTTCAGAGCTCCCCTGATTTGCTTAGAGACTATTGGGGTTATTCTCAGCTTCTGCGGAGCACAGGGGAGTTCCATGGACTCGATCAGTGGTTCTATGATTCGCAAATGGCAGCGCTTCAATCTTCTTCATCGTCGTCGTTGTTGCCGCTACCGCCTGCGTATGCACCATCCTCTGCTTCCTTTCCTCTGTTTTCCAGCCAGCAGATGGGAGTTTTCCGGCCGCCGGGGCAACAGCATCACGGCGGAGGGGACAGCGGTAGCGGGTCAGAGTTTCCACCTTCGTCATGGTCAGATACGAGTAGTTATCCTCCTCCACCTCCACCACCTGGTTGA 825 0.5855 MMSRFMHAPSPGLSSSPGPPLLGSGSGSGSVGQKRAREDDTGAAASGGEGASSQSASREESGERRRRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVTAVRPPHLPDFPATSLAGSGDVPAVTGYSPTVMQGAPFQSSPDLLRDYWGYSQLLRSTGEFHGLDQWFYDSQMAALQSSSSSSLLPLPPAYAPSSASFPLFSSQQMGVFRPPGQQHHGGGDSGSGSEFPPSSWSDTSSYPPPPPPPG 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03092 274 CDD AP2 75 126 IPR001471 GO:0003700|GO:0006355
Viun7g03092 274 Gene3D AP2/ERF domain 66 126 IPR036955 GO:0003700|GO:0006355
Viun7g03092 274 MobiDBLite consensus disorder prediction 1 74 - -
Viun7g03092 274 MobiDBLite consensus disorder prediction 17 31 - -
Viun7g03092 274 SUPERFAMILY DNA-binding domain 67 125 IPR016177 GO:0003677
Viun7g03092 274 FunFam Ethylene-responsive transcription factor 2 66 125 - -
Viun7g03092 274 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Viun7g03092 274 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Viun7g03092 274 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Viun7g03092 274 MobiDBLite consensus disorder prediction 230 274 - -
Viun7g03092 274 Pfam AP2 domain 67 116 IPR001471 GO:0003700|GO:0006355
Viun7g03092 274 MobiDBLite consensus disorder prediction 246 261 - -
Viun7g03092 274 PANTHER DNA-BINDING DOMAIN 46 197 IPR044808 GO:0003700|GO:0009873
Viun7g03092 274 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03092 Viun-Chr7 33589209 33591861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03092 46 142 AP2-EREBP Transcription Factor Family AT2G33710 65.979 1.17e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Viun7g03092 AP2 2.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03092 - - gmx:100777915 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01817 4 32337551 32340312 Viun7g03092 7 33589209 33591861 PCT