Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03085 ATGTTCCATATGTCATGGTTACAGAAATTTCAGAAGTGTGAATATGCTAAAACAAAGTTGTTTAAAACTGAAGGCCGTGGATGGGGTCTTTTGGCTGATGAGGATCTTAAGGCAGGACAATTTGTCATCGAATACTGTGGAGAAGTTATATCATGGAAGGAAGCCAAACGTAGATCTCAGGCTTATGATGATCAAGGCCTTAAAGATGCATTTATCATTTGCCTTAATGCATCTGAATCTATTGATGCAACCAGGAAAGGAAGCCTTGCTAGATTTATAAATCATTCCTGTCAACCGAATTGTGAGACGAGAAAATGGAATGTGTTGGGGGAAATAAGAGTCGGAATATTTGCAAAACATGATATTCCTATTGGAACTGAATTAGCTTATGATTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGTTGCCTATGTGGTGCACTCAAATGTTCAGGGTTCCTTGGAGCAAAATCTCGTGGTTTTCAGGAGGATACTTATCTATGGGAAGATGATGATGATAGGTACTCTGTTGAGAAAATTCCTGTATATGATTCTGCAGAGGATGAACCAGTGTCAAATGTTAATGGACGAACTGAATCCTCTTTAGATGTGATGCTTAAAGCTGAGCAACTATCTGAGTCCACTGGTTTCAATGTTCAGTCCCTTGATTCAGTTCAGATGAAAGATTTAGATGTCAAAAAGATTAAAACTGAAGTAGCAGATGAGGATATGCACTTGTACTCCCACGATACTGAACAGGCGCTTTCACAAAAGAATGCAATGATATCACGAATCCGAGGTAATGCTGCAGGCAGAAACTATCACATTGGACCTAGGTCCATGTCTACCAAAAGATCAAGGGCATATAATGGCGGAAGGTTTAAAAATCTCGTAGAGAAGAAAATTGATGCCAAGTTTGCTGCTGGCCTCCTAGCATCCAAGGAAGCACAAGAAGAGATTTTACATTGTGAGAAAATAAAGGATGATGCTACATCTACTCTTGATTCCTTATACGATGAAATACGGCCTGCTATTGAGGAACACGAGAGGGATAGCCAAGACAGTGTATCCACCACTGTCGCAGAGAAGTGGATACAGGCTTGCTGCCTAAAATTGAAGGCTGAGTTTGATCTCTACTCGTCAATTGTGAAAAATGTTGCTTGCACTGCGCATAGGCCACCTGGACAACCAAAACCTACTGAAGTAGATAATGAAAACGAAATTAAGTTCTTGACAGGTTGA 1245 0.4008 MFHMSWLQKFQKCEYAKTKLFKTEGRGWGLLADEDLKAGQFVIEYCGEVISWKEAKRRSQAYDDQGLKDAFIICLNASESIDATRKGSLARFINHSCQPNCETRKWNVLGEIRVGIFAKHDIPIGTELAYDYNFEWFGGAKVRCLCGALKCSGFLGAKSRGFQEDTYLWEDDDDRYSVEKIPVYDSAEDEPVSNVNGRTESSLDVMLKAEQLSESTGFNVQSLDSVQMKDLDVKKIKTEVADEDMHLYSHDTEQALSQKNAMISRIRGNAAGRNYHIGPRSMSTKRSRAYNGGRFKNLVEKKIDAKFAAGLLASKEAQEEILHCEKIKDDATSTLDSLYDEIRPAIEEHERDSQDSVSTTVAEKWIQACCLKLKAEFDLYSSIVKNVACTAHRPPGQPKPTEVDNENEIKFLTG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03085 414 SUPERFAMILY SET domain 8 153 IPR046341 -
Viun7g03085 414 Gene3D SET domain 5 168 IPR046341 -
Viun7g03085 414 ProSiteProfiles Post-SET domain profile. 140 156 IPR003616 -
Viun7g03085 414 PANTHER SET DOMAIN PROTEINS 8 399 - -
Viun7g03085 414 ProSiteProfiles SET domain profile. 16 133 IPR001214 GO:0005515
Viun7g03085 414 SMART set_7 16 139 IPR001214 GO:0005515
Viun7g03085 414 Pfam SET domain 27 133 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03085 Viun-Chr7 33538932 33546099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03085 16 155 C2H2 Transcription Factor Family AT2G23740 34.375 5.77e-18 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g03085 SET 7.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03085 - - gmx:100775294 746.888