Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03084 ATGTCAATTAACAAGGACATTGTTACTTTGAAGGATCCTTTTAGTGAAGAGTTGCCTCAGTACATACATATAAATCAGAATGAGTTTTTCATGCGAAGGCACAAAAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAAATATGATGCTGATGACACTGACAGTGCATGCGGGGATAGCTGCTTGAATGTTTTAACCAGCACAGAATGCACCCCTGGTTATTGCCCTTGTGATATCTTGTGCAAAAATCAGAAATTTCAGAAGTGTGAATATGCTAAAACAAAGTTGTTTAAAACTGAAGGCCGTGGATGGGGTCTTTTGGCTGATGAGGATCTTAAGGCAGGACAATTTGTCATCGAATACTGTGGAGAAGTTATATCATGGAAGGAAGCCAAACGTAGATCTCAGGCTTATGATGATCAAGGCCTTAAAGATGCATTTATCATTTGCCTTAATGCATCTGAATCTATTGATGCAACCAGGAAAGGAAGCCTTGCTAGATTTATAAATCATTCCTGTCAACCGAATTGTGAGACGAGAAAATGGAATGTGTTGGGGGAAATAAGAGTCGGAATATTTGCAAAACATGATATTCCTATTGGAACTGAATTAGCTTATGATTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGTTGCCTATGTGGTGCACTCAAATGTTCAGGGTTCCTTGGAGCAAAATCTCGTGGTTTTCAGGAGGATACTTATCTATGGGAAGATGATGATGATAGGTACTCTGTTGAGAAAATTCCTGTATATGATTCTGCAGAGGATGAACCAGTGTCAAATGTTAATGGACGAACTGAATCCTCTTTAGATGTGATGCTTAAAGCTGAGCAACTATCTGAGTCCACTGGTTTCAATGTTCAGTCCCTTGATTCAGTTCAGATGAAAGATTTAGATGTCAAAAAGATTAAAACTGAAGTAGCAGATGAGGATATGCACTTGTACTCCCACGATACTGAACAGGCGCTTTCACAAAAGAATGCAATGATATCACGAATCCGAGGTAATGCTGCAGGCAGAAACTATCACATTGGACCTAGGTCCATGTCTACCAAAAGATCAAGGGCATATAATGGCGGAAGGTTTAAAAATCTCGTAGAGAAGAAAATTGATGCCAAGTTTGCTGCTGGCCTCCTAGCATCCAAGGAAGCACAAGAAGAGATTTTACATTGTGAGAAAATAAAGGATGATGCTACATCTACTCTTGATTCCTTATACGATGAAATACGGCCTGCTATTGAGGAACACGAGAGGGATAGCCAAGACAGTGTATCCACCACTGTCGCAGAGAAGTGGATACAGGCTTGCTGCCTAAAATTGAAGGCTGAGTTTGATCTCTACTCGTCAATTGTGAAAAATGTTGCTTGCACTGCGCATAGGCCACCTGGACAACCAAAACCTACTGAAGTAGATAATGAAAACGAAATTAAGTTCTTGACAGGTTGA 1476 0.4004 MSINKDIVTLKDPFSEELPQYIHINQNEFFMRRHKKQKEEDIAICECKYDADDTDSACGDSCLNVLTSTECTPGYCPCDILCKNQKFQKCEYAKTKLFKTEGRGWGLLADEDLKAGQFVIEYCGEVISWKEAKRRSQAYDDQGLKDAFIICLNASESIDATRKGSLARFINHSCQPNCETRKWNVLGEIRVGIFAKHDIPIGTELAYDYNFEWFGGAKVRCLCGALKCSGFLGAKSRGFQEDTYLWEDDDDRYSVEKIPVYDSAEDEPVSNVNGRTESSLDVMLKAEQLSESTGFNVQSLDSVQMKDLDVKKIKTEVADEDMHLYSHDTEQALSQKNAMISRIRGNAAGRNYHIGPRSMSTKRSRAYNGGRFKNLVEKKIDAKFAAGLLASKEAQEEILHCEKIKDDATSTLDSLYDEIRPAIEEHERDSQDSVSTTVAEKWIQACCLKLKAEFDLYSSIVKNVACTAHRPPGQPKPTEVDNENEIKFLTG 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03084 491 SUPERFAMILY SET domain 18 230 IPR046341 -
Viun7g03084 491 ProSiteProfiles Post-SET domain profile. 217 233 IPR003616 -
Viun7g03084 491 ProSiteProfiles SET domain profile. 93 210 IPR001214 GO:0005515
Viun7g03084 491 Gene3D SET domain 4 245 IPR046341 -
Viun7g03084 491 ProSiteProfiles AWS domain profile. 40 91 IPR006560 GO:0005634|GO:0042054
Viun7g03084 491 SMART shorttest3 40 92 IPR006560 GO:0005634|GO:0042054
Viun7g03084 491 PANTHER SET DOMAIN PROTEINS 17 476 - -
Viun7g03084 491 Pfam SET domain 104 210 IPR001214 GO:0005515
Viun7g03084 491 SMART set_7 93 216 IPR001214 GO:0005515
Viun7g03084 491 Pfam AWS domain 52 90 IPR006560 GO:0005634|GO:0042054
Viun7g03084 491 FunFam Histone-lysine N-methyltransferase 7 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03084 Viun-Chr7 33538932 33546099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03084 75 232 C2H2 Transcription Factor Family AT2G23740 33.708 1.20e-20 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g03084 SET 1.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03084 - - gmx:100804657 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03084 7 33538932 33546099 Viun7g03084 7 33538932 33546099 ECH