Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03082 ATGGAGCACACCTTCCAAGCCATAGTCGCTGCCATAGGCAGCTTCTTCGTCGTCACGCTTCTCCTCGCCGGCGTCATCATCCTCTGCCAGCAGTACCACAACTCCTCCAAAGCCCGCACCCGCGCTCGCGCCATTCAGAGATCAACCCGCCCCGCCCCCGCCCGCGATGCCTCTTTCTCTCTAGCCGTTGTCGACGCCAGCTGGTCCTCCGACCCCAACCTCATCAAGATCACGTGGGAGGAGCTCGCCGTCGCCACCGAAAACTTCTCCCCACACCTCATCGTCGGCGACGGCAGCTTCGGCCTCGTCTACAAGGCCCGCCTCTCCACCAACGCCCTCGTCGCAGTCAAGAAGCTCTCCCCTGACGCCTTCCAGGGTTTCCGCGAGTTCCGGGCGGAGATGGAAACCCTAAGCAAGCTCGACCACCCAAACATCGTCAGAATCCTCGGGTACTGGGCCTCCGGCCCAGAACGCTTACTCGTCTACGAGTTCATCGAAAAGGGAAACCTCGACCAGTGGCTCCACGAGCCCGATCTCTCTCGCTCCCCCCTGTCCTGGGAAACTCGAGTCAACATCATCCGCGGCGTGGCCCACGGGCTTTCCTACCTCCACGGGCTCGAGAAGCCCGTCATTCATCGCGACATAAAGGCCAGCAACATCCTGCTGGACTCCAAGTTCCAGGCCCACATCGCTGACTTTGGGCTTGCGCGCAGGATGGATAAAACGCACTCCCACGTTTCCACGCAGTTCGCCGGCACCATGGGGTACATGCCGCCCGAATACATTGAAGGGTCGAATGTGGCGAACACGAAGGTGGATGTGTACAGTTTTGGGATTTTGATGATTGAGACGATGGCGAGTCACCGGCCGAATTTGCCAATGAAATTGGGCCAGAGTGACATTGGGATGGTCCAGTGGGCGAGGAAGATGAGGGAGCAAAATGCGGAGATGGAGATGGTTGATGTGAATATTTCAAGAGAAGGGTTGAGTGAGGAAAGTGTTAAGGAGTATGTGCGCATAGCTTGTGAATGCACCAGTCAATTGCAGAAGGAAAGACCCTCAATGCCAGAAGTTGTTGAATGGTTGGACTCCATGCCTCTCAAACCTCTCTTCTCATCCTAA 1122 0.5722 MEHTFQAIVAAIGSFFVVTLLLAGVIILCQQYHNSSKARTRARAIQRSTRPAPARDASFSLAVVDASWSSDPNLIKITWEELAVATENFSPHLIVGDGSFGLVYKARLSTNALVAVKKLSPDAFQGFREFRAEMETLSKLDHPNIVRILGYWASGPERLLVYEFIEKGNLDQWLHEPDLSRSPLSWETRVNIIRGVAHGLSYLHGLEKPVIHRDIKASNILLDSKFQAHIADFGLARRMDKTHSHVSTQFAGTMGYMPPEYIEGSNVANTKVDVYSFGILMIETMASHRPNLPMKLGQSDIGMVQWARKMREQNAEMEMVDVNISREGLSEESVKEYVRIACECTSQLQKERPSMPEVVEWLDSMPLKPLFSS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03082 373 CDD STKc_IRAK 95 365 - -
Viun7g03082 373 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Viun7g03082 373 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 365 - -
Viun7g03082 373 Gene3D Phosphorylase Kinase; domain 1 57 164 - -
Viun7g03082 373 SMART serkin_6 89 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03082 373 ProSiteProfiles Protein kinase domain profile. 89 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03082 373 Pfam Protein kinase domain 94 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03082 373 FunFam Phytosulfokine receptor 2 165 366 - -
Viun7g03082 373 Gene3D Transferase(Phosphotransferase) domain 1 165 367 - -
Viun7g03082 373 SUPERFAMILY Protein kinase-like (PK-like) 71 368 IPR011009 -
Viun7g03082 373 FunFam Phytosulfokine receptor 2 48 164 - -
Viun7g03082 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03082 Viun-Chr7 33535703 33537600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03082 74 362 Receptor kinase-like Gene Family AT5G07280 44.330 1.76e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Viun7g03082 Pkinase 3.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03082 - - gmx:100802728 611.298