Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03078 ATGGGCTGTGTACAGGCCAAGCCATTGGATTCGGAAGGTCCAGACTACAGGGACCTAGAGAGGTTGAAGTTGGATAATGGGTATGTCGCAAGTTCTGACTTTGTCGCACATAGGAGATCCACTGGCCAAAGACATGACCCCAATAAGGACCACCATCACAGGCTGCACCAGCATCAGAGAGAACAACCCGTAAAGAATATAGTTGAGTCTGGTGTTGCCAAGGATGTTGCTGGGCATCATAAGGGCAAGGTGGTTGGAAGAGAGGGGAGGCGAGTCACGCGTCGTGATGATAAGAAAGTGACAAACAAGTCTTGCTTTGAGGATGAGATGGTAGATGGGTGGCCGAGGTGGTTGGTTGATAATGTCCCTGCACAAGTGTTGGCTGGTTTGGTTCCCAGGAGTGCTGAATCCTACAAAATGATTGATAAGGTTGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTGGATAGAGACACAGGAGAAATTGTGGCCCTGAAGAAGGTTCGCTTCAATACATCAGAGCCTGAAAGCATAAAGTTTATGGCAAGAGAAATTACGATATTACAGAGACTGGATCATCCCAATGTAGTCAAACTTAAAGGATTAGCCACTTCAAGAATGCAGTACAGTATATATCTAGTTTTTGACTTCATGCAAACGGATTTGGCACGAGTTATTGCTCGTCCTGAAAGACTATCAGAACCACAGGTCAAGTGCTATATGCATCAATTACTTTCAGGTCTGCAGCATTGCCATGATAGGGGAATTCTTCATCGAGATATAAAGGGATCAAACCTTTTGATTGATAAAAATGGGATGCTTCAGATTGCAGATTTTGGACTTGCCAATTTCTATGGTCCAGATCATCATCAACCTCTCACTAGCCGGGTTGTGACGCTATGGTACAGAGCTCCTGAATTGTTGTTAGGTGACACAGACTATGGAGTTGGTGTTGATCTGTGGAGTGCTGGATGTCTCCTCGCAGAAATGTTCAAAGGATTCCCAATCATGCCTGGTAGAAATGAGGTTGAGCAAATTCATAAAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTGAAACTTTCTATAACTTTTAGACCTCCGAAGTCTTATAGACCCAGCCTTATAGAAACTTTCGGGGATCTCCCTTCTTCTTCTTTAGGTCTTTTATGCACTTTGCTTGCTTTGGATCCTGCATTCCGTGGAACTGCATTCAAAGCTCTTAAAAATCAGTTTTTCTTTTCAAGCCCATTGGCGTGTGACCTCTCTGGTCTGCCTGTACTCTTCAGAGAGGATGATGAGCATGTTCAAGCCAACGAACAGATCAAGTACATGAACTCTAAAATCAGACGTTCTCGTACATATCTGGAGCGTCGTAAGAGTTCAGCATCTAAGAGGCCAATAGAGCATACTGTATCTTCTAAAGAGGAATTGATAAGGAATGCTAAACCTGAAACTTATGCTCCAACTGAAGACATGGGTAGCACAAGTAGTACCTCATCTAGTGTAAACCCAGGAGGGGCTAAGGACCAATCACCTTTTTTTCTATCTCCATTTGGGGAATTAGATCGAAAGCTATCTCCAAAAACCCACCACCACCACCATGTTAATGTTGGTGAACAAAACATCAAAAACCTTCCTCCATTACCTAAATCTAAACCAAATGCTACCAAGAAAGATGACAGTAGATACAGACCTGACCAGTTTTTCAGGTCAGCTTCCACCAGAGAATTCAGATACTTAAAAAGAGAAGAACGTTTACTATTGGATTTTGATCATTAG 1800 0.4294 MGCVQAKPLDSEGPDYRDLERLKLDNGYVASSDFVAHRRSTGQRHDPNKDHHHRLHQHQREQPVKNIVESGVAKDVAGHHKGKVVGREGRRVTRRDDKKVTNKSCFEDEMVDGWPRWLVDNVPAQVLAGLVPRSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREITILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMQTDLARVIARPERLSEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLQIADFGLANFYGPDHHQPLTSRVVTLWYRAPELLLGDTDYGVGVDLWSAGCLLAEMFKGFPIMPGRNEVEQIHKIFRLCGTPSEEYWRKLKLSITFRPPKSYRPSLIETFGDLPSSSLGLLCTLLALDPAFRGTAFKALKNQFFFSSPLACDLSGLPVLFREDDEHVQANEQIKYMNSKIRRSRTYLERRKSSASKRPIEHTVSSKEELIRNAKPETYAPTEDMGSTSSTSSSVNPGGAKDQSPFFLSPFGELDRKLSPKTHHHHHVNVGEQNIKNLPPLPKSKPNATKKDDSRYRPDQFFRSASTREFRYLKREERLLLDFDH 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03078 599 FunFam Putative serine/threonine-protein kinase 221 457 - -
Viun7g03078 599 PANTHER CELL DIVISION PROTEIN KINASE 136 424 - -
Viun7g03078 599 FunFam probable serine/threonine-protein kinase At1g54610 125 220 - -
Viun7g03078 599 SUPERFAMILY Protein kinase-like (PK-like) 133 424 IPR011009 -
Viun7g03078 599 MobiDBLite consensus disorder prediction 496 514 - -
Viun7g03078 599 MobiDBLite consensus disorder prediction 461 520 - -
Viun7g03078 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Viun7g03078 599 Pfam Protein kinase domain 138 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03078 599 Gene3D Phosphorylase Kinase; domain 1 132 229 - -
Viun7g03078 599 MobiDBLite consensus disorder prediction 74 98 - -
Viun7g03078 599 SMART serkin_6 138 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03078 599 MobiDBLite consensus disorder prediction 544 571 - -
Viun7g03078 599 MobiDBLite consensus disorder prediction 461 488 - -
Viun7g03078 599 Gene3D Transferase(Phosphotransferase) domain 1 230 426 - -
Viun7g03078 599 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Viun7g03078 599 MobiDBLite consensus disorder prediction 38 98 - -
Viun7g03078 599 ProSiteProfiles Protein kinase domain profile. 138 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03078 Viun-Chr7 33510463 33514256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03078 133 433 Core Cell Cycle Gene Families AT5G10270 46.250 3.37e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Viun7g03078 Pkinase 6.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03078 K08819 - gmx:100776854 994.571