Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03003 ATGGACCCTCTCTCTGCCACCAAACACAACAAGAATTTCGCCAAGCCTTCCTCCCTTAACATGGAGACTCCGCCGGCGGATCCCAGTCCCCTCCGGAAGATCATGGCTGTGGCATCCATCGCCGCAGGGGTGCAGTTCGGCTGGGCCCTGCAGCTCTCCCTCCTCACCCCCTACGTTCAGCTGCTGGGAATTCCCCACTCTTGGGCCTCCTTCATCTGGCTCTGCGGCCCAGTCTCCGGCATGCTGGTCCAGCCCATCGTCGGCTACCACAGCGACCGCTGCACTTCCCGCTTCGGCCGCCGCCGTCCCTTCATCGCCGCCGGAGCCCTGGCCGTTGCCATCGCCGTCTTTCTCATAGGCTACGCCGCCGACCTCGGCCACATTTTCGGCGACTCCCTCGCCAAGAAAGTCCGCCCACGCGCCATCGCCATCTTCGTCGTCGGCTTCTGGATCCTGGACGTCGCCAACAACATGCTCCAGGGCCCCTGCCGTGCCCTCCTCGCCGACCTCTCCGCCGGCGACCACCGAAAAACGCGCAACGCCAACTCCTTCTTCTCCTTCTTCATGGCCGTAGGCAATGTCCTGGGGTACGCCGCGGGGTCCTACAGCGGCCTCCACCACGTCTTCCCCTTCACCAAAACCAAAGCCTGCAACGTCTACTGCGCCAATCTCAAAAGCTGCTTCTTCCTCTCCATCGCGCTCCTCCTCAGTCTGGCCACCATCGCCCTCACTTACGTGAAGGAGGAACCGGTGGCGTCCGAAAAAAACAGCGCGAGCGTTGTGGAAGAAGATGGGTCCCACGGGGGCATGCCCTGTTTTGGGCAGTTATTCGGTGCGTTTCGGGAACTGAAGCGTCCCATGTGGATCCTTCTCTTGGTGACGTGTCTCAACTGGATTGCGTGGTTCCCCTTCCTTCTCTTCGACACCGACTGGATGGGCCGTGAGGTCTACGGCGGAAGCGTCGGAGAAGGAAAGGCCTACGATAGAGGCGTGCGCGCCGGTTCTTTAGGTCTCATGTTGAACTCTCTCGTCCTCGGAGCCACCTCCTTGGGCGTCGATGTCCTCGCGCGTGGAGTTGGGGGCGTCAAGAGGCTCTGGGGAATCGTCAACTTCTTGCTCGCTATCTGTTTGGCCATGACCGTTTTGGTCACCAAGATGGCCGCGCATTCTCGCCAGTACACTGACCTCCCCGGCGGCATCCACGAGCCCCTGCCTCCTCCCGCCGGCGTAAAAGCCGGCGCGTTGGCCCTCTTTTCCGTCCTCGGAATCCCTCTCGCGATTACTTACAGCATACCCTTTGCTCTGGCATCAATATTCTCCACCACCTCAGGAGCAGGCCAAGGATTATCTCTGGGAGTCCTCAATCTTGCAATCGTCGTACCACAGATGGTGGTGTCTGTGATCAGTGGACAATGGGATAAACTATTTGGCGGCGGTAACTTGCCGGCGTTTGTATTGGGTGCGGTGGCGGCTGCGGCCAGTGGCATTCTATCCGTAATCCTGCTGCCATCTCCACCGCCGGATCTGGCGAAAGCTGCAACCGCAGCAGGGGAGGGTTCCATTAATGAGTCGATGATGTTCGTGTTTTTGTCGAAAAAGGAGGACGTACGGTTTTTTTTTTTTGTTTGA 1629 0.5948 MDPLSATKHNKNFAKPSSLNMETPPADPSPLRKIMAVASIAAGVQFGWALQLSLLTPYVQLLGIPHSWASFIWLCGPVSGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADLGHIFGDSLAKKVRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGDHRKTRNANSFFSFFMAVGNVLGYAAGSYSGLHHVFPFTKTKACNVYCANLKSCFFLSIALLLSLATIALTYVKEEPVASEKNSASVVEEDGSHGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGSVGEGKAYDRGVRAGSLGLMLNSLVLGATSLGVDVLARGVGGVKRLWGIVNFLLAICLAMTVLVTKMAAHSRQYTDLPGGIHEPLPPPAGVKAGALALFSVLGIPLAITYSIPFALASIFSTTSGAGQGLSLGVLNLAIVVPQMVVSVISGQWDKLFGGGNLPAFVLGAVAAAASGILSVILLPSPPPDLAKAATAAGEGSINESMMFVFLSKKEDVRFFFFV 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03003 542 MobiDBLite consensus disorder prediction 1 26 - -
Viun7g03003 542 FunFam Sucrose transport protein 28 502 - -
Viun7g03003 542 PANTHER SUGAR TRANSPORTER 31 501 - -
Viun7g03003 542 CDD MFS_SLC45_SUC 34 497 - -
Viun7g03003 542 MobiDBLite consensus disorder prediction 10 24 - -
Viun7g03003 542 Pfam MFS/sugar transport protein 42 299 - -
Viun7g03003 542 NCBIfam sucrose/proton symporter 30 507 IPR005989 GO:0005886|GO:0008515|GO:0015770
Viun7g03003 542 SUPERFAMILY MFS general substrate transporter 32 506 IPR036259 -
Viun7g03003 542 Gene3D MFS general substrate transporter like domains 27 502 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03003 Viun-Chr7 33020503 33023549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03003 17 508 Sucrose Transporter Gene Family AT1G22710 69.800 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03003 K15378 - gmx:547679 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01657 4 30134480 30137583 Viun7g03003 7 33020503 33023549 PCT