Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02992 ATGAGTGTTGGAGAGTGTTGGAGATTGATGGAGATGGAGATGGAGATGGAGGAGGAAACTGAGAAAATGTCGAAAGATGGGAGCGCATCAAAGTGCAAAAGCGTGTTGCCGCACGAGACCCCGGACCTGAAGGAGGACTACATTGTGGGGCAGAAGGTGCTGGGAAAAGGGCGCTTGGGCACAACCTACGTCTGCACCCACATGGACACAAGGAAGACTTACGCCTGCAAAACCATTCCAAAGGCCAAGCTTTTGTGCCAAGAGGAGTACGATGATGTGTGGAGGGAGATTCAGATCCTGCACCATTTGTCGGAGCACCCCAACGTGGCAAGGATACAGGGAAGCTACGAGGACAAGTTTGCGGTGCACCTTGTGATTGAGCTGTGTCGTGGGGGTGAGCTTTTCTATAGGATCACTCAGAAGGGGCATTACAGCGAGAGAGAGGCTGCCAAGTTGATGAAGACCATTGTTGGGGTGGTGGAAGGCTGCCACGCTCATGGGGTCATTCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATACCCTCGCCAGGGATGCCACCCTCAAGGTTATCGATTTTGGTTTCTCTGTCTTCTTTAAACCAGGACAAACCTTTAGTGATATAGTAGGAACTTGCTACTATATGGCCCCAGAGGTGTTGCACAAACAGTCTGGACCAGAAGTGGACGTTTGGAGTGCTGGTGTTATTCTATACACCTTACTGAGAGGGCTTCCACCTTTCTGGGCAAAATCTGAAGCAGGAGTTTACAAACAGATTTTGCATGCAGAAGTTGATTTTACATCTCATCCGTGGCCAAGTATATCAGGAAGTGCTAAAGATTTGATAAAACAGATGTTGGATAAGGACCCCAAAAAAAGAATTTCTGCTCATGAAGTCTTATGTCACCCTTGGATTCTTGATGATAGTGTTGCCCCGGACAAACCTCTGGATCCTGCTGTTTTGACGCGCCTAAAGCATTTCTCAACAATGAATAAACTTAAGAAGATGGCGTTACGTGTCATTGTAGAAAGACTTTCAGAGGAGGAAATAGGTGGATTAAAAGAGTTATTTAAAATGATTGACGAAGACAATAGCGGGACAATCACTTTTCAGGAACTCAAAGATGGTTTGAAAAGTGTGGGATGTGATCTCATGGAATCTGAAATTAGATCCCTTATGGAAGCGGCTGATATAGACAACAATGGAACAATAGACTATGGTGAATTTCTGGCGGCTACAATGCACTTGAATAAGATGGAAAGAGAAGAGAATTTAGTTGCTGCTTTTTCCTATTTTGATAAAGATGGTAGTGGTTACATCACCATTGATGAGCTTCAACAGGCTTGTAAAGACTTCGGCCTTGGTGAGTTGCATCTGGATGAGATGATCAAAGAGATTGATCAAGACAATGATGGGAGAATTAATTATGGGGAGTTTGCAACAATGATGAGAAGGGGCGAACCAGGTGGTTGTAGAAGCAAAGTCATGAACAGCAATCATAAAGCTTCATTATTTCCTGGTTTAGAAGTGAAAGACTCATCCTAA 1548 0.4464 MSVGECWRLMEMEMEMEEETEKMSKDGSASKCKSVLPHETPDLKEDYIVGQKVLGKGRLGTTYVCTHMDTRKTYACKTIPKAKLLCQEEYDDVWREIQILHHLSEHPNVARIQGSYEDKFAVHLVIELCRGGELFYRITQKGHYSEREAAKLMKTIVGVVEGCHAHGVIHRDLKPENFLFDTLARDATLKVIDFGFSVFFKPGQTFSDIVGTCYYMAPEVLHKQSGPEVDVWSAGVILYTLLRGLPPFWAKSEAGVYKQILHAEVDFTSHPWPSISGSAKDLIKQMLDKDPKKRISAHEVLCHPWILDDSVAPDKPLDPAVLTRLKHFSTMNKLKKMALRVIVERLSEEEIGGLKELFKMIDEDNSGTITFQELKDGLKSVGCDLMESEIRSLMEAADIDNNGTIDYGEFLAATMHLNKMEREENLVAAFSYFDKDGSGYITIDELQQACKDFGLGELHLDEMIKEIDQDNDGRINYGEFATMMRRGEPGGCRSKVMNSNHKASLFPGLEVKDSS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02992 515 ProSitePatterns EF-hand calcium-binding domain. 398 410 IPR018247 -
Viun7g02992 515 Gene3D Phosphorylase Kinase; domain 1 49 133 - -
Viun7g02992 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Viun7g02992 515 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Viun7g02992 515 CDD EFh 426 485 IPR002048 GO:0005509
Viun7g02992 515 Pfam Protein kinase domain 51 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02992 515 Gene3D - 315 487 - -
Viun7g02992 515 SMART efh_1 425 453 IPR002048 GO:0005509
Viun7g02992 515 SMART efh_1 459 487 IPR002048 GO:0005509
Viun7g02992 515 SMART efh_1 389 417 IPR002048 GO:0005509
Viun7g02992 515 SMART efh_1 353 381 IPR002048 GO:0005509
Viun7g02992 515 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Viun7g02992 515 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
Viun7g02992 515 FunFam Calcium-dependent protein kinase 5 134 314 - -
Viun7g02992 515 ProSiteProfiles EF-hand calcium-binding domain profile. 349 384 IPR002048 GO:0005509
Viun7g02992 515 CDD STKc_CAMK 46 305 - -
Viun7g02992 515 ProSiteProfiles EF-hand calcium-binding domain profile. 385 420 IPR002048 GO:0005509
Viun7g02992 515 SMART serkin_6 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02992 515 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 480 - -
Viun7g02992 515 ProSitePatterns EF-hand calcium-binding domain. 362 374 IPR018247 -
Viun7g02992 515 SUPERFAMILY EF-hand 345 485 IPR011992 -
Viun7g02992 515 CDD EFh 354 413 IPR002048 GO:0005509
Viun7g02992 515 ProSiteProfiles EF-hand calcium-binding domain profile. 457 490 IPR002048 GO:0005509
Viun7g02992 515 Pfam EF-hand domain pair 354 414 IPR002048 GO:0005509
Viun7g02992 515 Pfam EF-hand domain pair 424 485 IPR002048 GO:0005509
Viun7g02992 515 FunFam Aurora kinase A 40 132 - -
Viun7g02992 515 Gene3D Transferase(Phosphotransferase) domain 1 134 314 - -
Viun7g02992 515 ProSiteProfiles Protein kinase domain profile. 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02992 515 FunFam Calcium-dependent protein kinase 1 314 488 - -
Viun7g02992 515 SUPERFAMILY Protein kinase-like (PK-like) 33 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02992 Viun-Chr7 32895070 32899796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02992 23 515 EF-hand Containing Proteins AT4G09570 68.154 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Viun7g02992 Pkinase 9.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02992 K13412 - gmx:100811596 832.402