Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02989 ATGACGTTAACCCAAATTCCTGAGAGATCATCGGTTGATATGGAATCATGCGTGCCTCCCGGATTCAGATTTCATCCAACAGAAGAGGAACTTGTGGGGTACTATCTCAAGAGGAAGATAAACTCCCTAAAAATCGATCTAGATGTTATTGTTGAGATTGATCTCTACAAAATGGAACCATGGGACATTCAAGATAGGTGCAAGCTAGGATATGAGCAACAGAATGAGTGGTACTTTTTCAGCCATAAAGATAAGAAGTATCCTACAGGAACAAGAACTAACAGGGCCACTGCTGCTGGATTCTGGAAAGCAACTGGAAGGGACAAGGCTGTTATGACCAAAAATAGAATCATAGGAATGAGGAAAACCTTGGTCTTCTACAAGGGACGTGCCCCTAATGGAAGGAAAACAGACTGGATTATGCATGAATATAGGCATCAAACCTCTGAACATGGTCCTCCACAGGAAGAAGGATGGGTTGTGTGCCGAGCATTTCGAAAGCCTAGTCCAAGTCACAGGCAAGGTTATGAGCCATGGTGCAGCAGTAGTAGTAGTAGTAGCCATCAACAACACTTTTTCAGAGATCAAAGCTTCGCAAGACCCTTATCAATTGCTGATATTTTGAATGAAACAAATGTGCCTCATCATCATCATCACCCTGCAGAAGCTCCAAGCTTTACTCTTCCTTTCAACTCAGATAATCAGCAACACTTTCTTCTGCCAAACCAAACTGTCATGGACAAACAACTCATTGAGCTTCCTCAGCTAGATAGTCCCACTGCAAGTTTTGCAATGAAGGACTGTAACCAACAACAGCACCACAATGGCCTCACAAATGAGGAATATTGTAGTGATGAAAGGAGCAATAGCAGTGCGCAAGGTATCGATTGGAAGAGTTTGGACAACTTGTTCGGGTCACAACTGAGTGACACACCTTATTTTTCACATCCAAACTTGCCCTTGATGATGCCACATAATAACCATGATCAACCTAGTCATATCCTAGGATGTTTCCCTGATTCATAG 1026 0.4269 MTLTQIPERSSVDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMTKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHRQGYEPWCSSSSSSSHQQHFFRDQSFARPLSIADILNETNVPHHHHHPAEAPSFTLPFNSDNQQHFLLPNQTVMDKQLIELPQLDSPTASFAMKDCNQQQHHNGLTNEEYCSDERSNSSAQGIDWKSLDNLFGSQLSDTPYFSHPNLPLMMPHNNHDQPSHILGCFPDS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02989 341 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Viun7g02989 341 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
Viun7g02989 341 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Viun7g02989 341 FunFam Nac domain-containing protein 86 27 170 - -
Viun7g02989 341 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Viun7g02989 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02989 Viun-Chr7 32869460 32874520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02989 14 341 NAC Transcription Factor Family AT1G71930 54.360 3.64e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun7g02989 NAM 7.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02989 - - var:108325420 629.017