Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02985 ATGGGTTCCTATGGAGGTGATGTAGTTGTCACAACCACTCCCAGAGAAGGAGATGATGAAGCTTTCGTTTCTGCTTTTTTACTTTGCACTAGTCAGGTATTTCCTTCAGTGCTCAATGCTGCTATTGAGCTTAAATTGTTTGAAATCATAGCCAAGGCAACACCACCAAATGCAGCCATGTCAGCCTCAGAAATTGCTTCTAAGTTACCAACGTTACCAACACAACACGTAGATAGGCTCCAACGCATGCTGCGTTTGCTTGCCAACTATTCTCTGCTCACTTGTTCCACTCACATCAATGAAGATGGTAGCACTGACACAACTTATGGAATCTCATGTGTTGGAAAATACTTTGTCAATGATGAAACAAGGGGTAGTTTTGGTCCCTTCACAACACTTTGCCAACATCCTACAGTGTTAGAACTTTGGCCAAATTTTAAGGATGTAATAGTTGATTCCGAGGACGACCTATGCAAGAAGGTTCATGGAATGTCTTTCTACCAATGCACTGAAAGAGATCCACAACTGAATTACATTTTCAACAAATCAATGGCTAATATTTGCAACTTAGAAATGAATAAGATTCTTGAAGAGTATAAAGGATTTGAAGGAGTGTCAACTCTGGTTGATGTGGGAGGTTGTACAGGGCAAACTCTGCACATGATAATCTCCAAGTACTCTACAATTAAGGGTATTAATTTTGACTTGTCTCATGTTGTTGAAAAAGCGCCACCTTACCCAGGGATACAGCATGTTGGAGGAGATATGCACCATTATGTACCAAAGGGTGATGCCATGATTCTAAAGGCTGTGTTGCACAATTGGTCAGATGAAGACTGCTTAAGCATTTTGAAGAACTGTCACAATGCACTGCCACATAATGGAAAGGTTGTTGTGATAGAATTTATAGCACCAGAAGAAGCATCAGAGTCTAATGTATCAAAGCTTGTATCCACACTCGACAACGCCATGTATATCACAAGTGGTGGGAAGGAAAGAAGTGAAAAGGAGTACGAGAAATTGTGCAAGCTTTCTGGATTCTCAAGATTTCAAGTTGTCTGTCGTGCTTTTTCTGTCTTAGGAACCATGGAATTTCACAAATAA 1104 0.404 MGSYGGDVVVTTTPREGDDEAFVSAFLLCTSQVFPSVLNAAIELKLFEIIAKATPPNAAMSASEIASKLPTLPTQHVDRLQRMLRLLANYSLLTCSTHINEDGSTDTTYGISCVGKYFVNDETRGSFGPFTTLCQHPTVLELWPNFKDVIVDSEDDLCKKVHGMSFYQCTERDPQLNYIFNKSMANICNLEMNKILEEYKGFEGVSTLVDVGGCTGQTLHMIISKYSTIKGINFDLSHVVEKAPPYPGIQHVGGDMHHYVPKGDAMILKAVLHNWSDEDCLSILKNCHNALPHNGKVVVIEFIAPEEASESNVSKLVSTLDNAMYITSGGKERSEKEYEKLCKLSGFSRFQVVCRAFSVLGTMEFHK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02985 367 Gene3D - 33 195 IPR036388 -
Viun7g02985 367 FunFam Caffeic acid 3-O-methyltransferase 7 118 - -
Viun7g02985 367 FunFam Caffeic acid O-methyltransferase 121 367 - -
Viun7g02985 367 SUPERFAMILY "Winged helix" DNA-binding domain 18 122 IPR036390 -
Viun7g02985 367 PANTHER O-METHYLTRANSFERASE 29 350 IPR016461 GO:0008168
Viun7g02985 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 358 IPR029063 -
Viun7g02985 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 367 IPR016461 GO:0008168
Viun7g02985 367 Gene3D Vaccinia Virus protein VP39 177 356 IPR029063 -
Viun7g02985 367 Pfam O-methyltransferase domain 143 348 IPR001077 GO:0008171
Viun7g02985 367 PIRSF O-mtase 9 367 IPR016461 GO:0008168
Viun7g02985 367 Pfam Dimerisation domain 37 88 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02985 Viun-Chr7 32821941 32823670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02985 18 359 Monolignol Biosynthesis Gene Families AT5G54160 47.230 5.45e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02985 - - gmx:100798347 445.277