Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02976 ATGGAAGATTCAGAGGAGGATGAGCTTTTGAATCTTAGCCTTTCAGTTGCTGCGGATAGGGAAAGGAAAAAGAAGGGAAAGATAATTAGGGAACATAACGTCTCTATGAGTAGTACTACTACTGCTAGGAACTCCTATGAAAGCTATGAAGGGAAGATATTTAGGCTTCTCCAAATAAGGGAGCAGATGCTAAGACAAGACCATAGGATGAAAGGAGTTGTGGAAGATAGGAATGGCCTTCCCTTGATCCATTTGCTGCTCTCAACTGCAACTGCTGTTGATGACAACAACTTGGATTCATCCTTAGAGAATCTCACTGATTTGTACCAAACTGTTTCCCTAACAGGTGACTCGGTTCAGCGTGTGGTGGCTTATTTTGCTGATGGTTTGGCCGCAAGGCTTCTCACAAGGAAATCCCCATTCTACGACATGCTCATGGAGGAACCAACCACCGAGGAAGAGTTGAATGCGTTCACAGATCTCTACAGGGTTTCACCTTACTACCAATTCGCTCATTTCACTGCAAACCAAGCTATCTTGGAGGCCTTCGAGAAAGAGGAAGAGAGAAACAACCGCGCTTTGCATGTCATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCCTCTCTCATTCAGTCTCTCTCCGAGAAGGCAACCACCGGCAACCGCATATCCCTCAGGATAACCGGATTCGGGAAGAATCTGAAAGAGCTTCAAGAAACTGAGTCTAGATTGGTTAGTTTCTCAAAGGGTTTTGGCAGTCTTGTGTTTGAATTCCAAGGGCTGCTTCGAGGCTCAAGGGTCATCAACCTAAGGAAGAAAAAGAATGAAACTGTGGCTGTCAACTTGGTTTCTTACTTGAACACTTTGAGTTGTTTTATGAAGATCTCTGACACATTGGGATTTGTTCATTCCCTTAACCCCTCCATTGTTGTGGTGGTGGAGCAAGAGGGTAGCAGGAGTCCCAGGAGCTTCTTGTCGAGGTTCACAGACTCCTTGCACTACTTTGCAGCCATGTTTGATTCACTGGATGATTGTCTCCCACTAGAGAGTGCCGAGAGGTTGAGAATTGAGAAGAAGCTTCTGGGGAAAGAGATCAAAAGCATGCTGAACAATGATGTGGATGGTGTGGATTGCCCAAAGTATGAGAGGATGGAAACATGGAAAGCGAGAATGGAGAATCATGGGTTTGTTGCCACCAAAATAAGCTCAAAGTCTATGATCCAAGCAAAACTGTTGCTGAAGATGAGAACCCATTATTGTCCTCTTCAGTTTGAGGAAGAAGGAGGTGGGGGTTTCAGGGTTTCTGAAAGAGATGAAGGAAGGGCTATCTCTTTAGGGTGGCAAAATAGGTTTCTGCTCACAGTCTCAGCATGGCAATCAGTCTGA 1389 0.4514 MEDSEEDELLNLSLSVAADRERKKKGKIIREHNVSMSSTTTARNSYESYEGKIFRLLQIREQMLRQDHRMKGVVEDRNGLPLIHLLLSTATAVDDNNLDSSLENLTDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMEEPTTEEELNAFTDLYRVSPYYQFAHFTANQAILEAFEKEEERNNRALHVIDFDVSYGFQWPSLIQSLSEKATTGNRISLRITGFGKNLKELQETESRLVSFSKGFGSLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLNPSIVVVVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKSMLNNDVDGVDCPKYERMETWKARMENHGFVATKISSKSMIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQSV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02976 462 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 69 455 IPR005202 -
Viun7g02976 462 Pfam GRAS domain family 82 460 IPR005202 -
Viun7g02976 462 Coils Coil 352 372 - -
Viun7g02976 462 ProSiteProfiles GRAS family profile. 73 460 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02976 Viun-Chr7 32782112 32783628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02976 75 459 GRAS Transcription Factor Family AT3G54220 35.787 2.03e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun7g02976 GRAS 1e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02976 - - gmx:100809458 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01646 4 29839007 29840912 Viun7g02976 7 32782112 32783628 PCT