Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02971 ATGGAGGAATCCAATGTTGTTACCAAGAACAACCTCATTACAACTTCTCCTAAAAAAAGTGACGAAGGTGCTCGTGTATCTGCAATGCTGCTTAGTACTGCAGTTGTGTACCCTGCAGTTCTGAACGCTGCTATTGAGCTGAACTTGTTTGAGATCATAGCCAAGGCAACACCACACACTTCGTTCATGTCATCTCATGAAATCGCTTCCAAGCTCCCAAACCAACACCCTGACTTGCCTAATAGGCTCGATCGCATGCTGCGTTTGCTTGCTGGTTATTCTCTTCTTACCACTTCCACACGCACCACACAACACGGTGCCACCGAGACAGTTTATGGACTCTCGCAAATTGGACAATACTATGCTCCTGATGCAGCTACAGGCTACTTCGCTTCATTCGCATCCTTTCTCTCTTGTCCTGCGCTCTCACCACTTTGGCCGAATTTCAAGGAAGCAGTGGTTGATCCAGACGTTGATCTATTCAAGAAAGTTCATGGGGTAACAACGTACCAGTATATGGAAAAGGATCCAAAAATGAACCAAATGTTTAACAGGACTGTGGCAGATTTGTGTGCAACAGATATGATTAGAATACTTGAAATATATACTGGATTTGAGGGAATATCAAGGTTGGTTGATGTAGGAGGTGCACATGGACAAAGCCTCAAAATGATAATCTCCAAATACCCTTCAATTAAAGGGATTAATTTTGATCTGCCCCACGTTATTGAGAATGCACCACTGCTATCAGGGGTTGAGCATGTTGGGGGAGATATGTTTGCAAGAGTTCCAGAGGGTGACGCCATGATACTAAAGTCTGTGTTGCACAACTGGTCTGATGAGAAGTGCGTAGAAATTTTAAGCAATTGTCACAAAGCACTGTCTGGAAATGGGAAGGTGATTATTCTGGAGATCATAATGCCAGAAGAACCAGAAGCAACCGAAGAATATAAGCTTTTTTCCTCCGTCGACAACCTAATGTTTATCACAGCAGGTGGAAAGGAAAGAACTGAGAAACAGTACGAGAATTTGTGCAAGCTCGCTGGTTTTTCAAAATTTCATGTTGCTTGTCCTGCCTCCTCTGGTCCGGGAGTGATGGAATTCTACAAATAA 1113 0.4349 MEESNVVTKNNLITTSPKKSDEGARVSAMLLSTAVVYPAVLNAAIELNLFEIIAKATPHTSFMSSHEIASKLPNQHPDLPNRLDRMLRLLAGYSLLTTSTRTTQHGATETVYGLSQIGQYYAPDAATGYFASFASFLSCPALSPLWPNFKEAVVDPDVDLFKKVHGVTTYQYMEKDPKMNQMFNRTVADLCATDMIRILEIYTGFEGISRLVDVGGAHGQSLKMIISKYPSIKGINFDLPHVIENAPLLSGVEHVGGDMFARVPEGDAMILKSVLHNWSDEKCVEILSNCHKALSGNGKVIILEIIMPEEPEATEEYKLFSSVDNLMFITAGGKERTEKQYENLCKLAGFSKFHVACPASSGPGVMEFYK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02971 370 FunFam Caffeic acid O-methyltransferase 124 370 - -
Viun7g02971 370 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Viun7g02971 370 Gene3D - 5 121 IPR036388 -
Viun7g02971 370 Pfam O-methyltransferase domain 146 351 IPR001077 GO:0008171
Viun7g02971 370 Gene3D Vaccinia Virus protein VP39 124 370 IPR029063 -
Viun7g02971 370 FunFam Caffeic acid 3-O-methyltransferase 7 121 - -
Viun7g02971 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 370 IPR016461 GO:0008168
Viun7g02971 370 PANTHER O-METHYLTRANSFERASE 28 368 IPR016461 GO:0008168
Viun7g02971 370 SUPERFAMILY "Winged helix" DNA-binding domain 20 124 IPR036390 -
Viun7g02971 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 359 IPR029063 -
Viun7g02971 370 PIRSF O-mtase 5 370 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02971 Viun-Chr7 32735335 32737757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02971 20 359 Monolignol Biosynthesis Gene Families AT5G54160 45.455 7.85e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02971 - - gmx:100787536 561.992