Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02970 ATGGGGGACCTCATTACAACTTCTCCTCAAAAAAGTGATGAAGGTGCTCGTGTATCTGCAATGCTGCTCAGTACTGCTGTGGTTTACCCTGCAGTTCTGAATGCTGCTATTGAGCTCAACCTGTTTGAGATCATAGCCAAGGCAACACCACACGGTTCATTCATGTCACCTCATGAAATTGCTTCCGAGCTCCCAAACCAGCACCCTGATTTGCCTGATAGGCTCGATCGCATGCTGCGTTTGCTTGCTAGTTATTCTCTTCTTACCAGTTCAACACGCACCACACAGCATGGTGCCACTGAGACAGTTTATGGACTCTCACAAATTGGACAATACTATGCCACCGGTGCAACTACAGGCTACTTCGCTTCATTCGCATCCTATCTCTCTTGCCCTGCACTCTCACAACTTTGGCCGAGTTTCAAGGAAGCAGTGGTTAATGCAGATGTTGATTTGTTCAAGAAAGTTCATGGGATAGGAGCGTTCCAGTACATGGAAAAGGATCCAAAAATGAACCAAATGTTTATCAGGGCAATGGCAGATTTGTGTGCAACAGATATGATTAGAGTACTTGAAATATATGCTGGATTTGAGGGAATATCAACGTTGGTTGATGTAGGAGGAGGAAATGGACAAAACCTCAAAATGATAATCTCCAAATACCCTTCCATTAAAGGAATTAATTTTGATCTGCCCCAAGTCATTGAGAATGCACCACTGCTATCAGGGGTTGAGCATGTTGGAGGAGATATGTTTGCAAGAGTTCCAGAGGGTGACGCCATGATACTAAAGGTTGTGTTGCACAACTGGTCTGATGAGAAGTGCGTAGAAATTTTAAGCAATTGTCACAAAGCACTGTCTGGAAATGGGAAGGTGATTGTTCTGGAGATCATAATGCCAGAAGAACCAGAAGCAACGGAAGAATCTCAGCTTATTTCCTGCCTGGACAACCTCATGTTTATCTCAGCCGGTGGAAAGGAAAGAACTGAGAAACAGTACGAGAATTTGTGCAAGCTCGCTGGTTTTTCAAAATTTCATGTTGCTTGTCGTTCCTCCTCTGGTCCGGGAGTGATGGAATTCTACAAATAA 1089 0.4408 MGDLITTSPQKSDEGARVSAMLLSTAVVYPAVLNAAIELNLFEIIAKATPHGSFMSPHEIASELPNQHPDLPDRLDRMLRLLASYSLLTSSTRTTQHGATETVYGLSQIGQYYATGATTGYFASFASYLSCPALSQLWPSFKEAVVNADVDLFKKVHGIGAFQYMEKDPKMNQMFIRAMADLCATDMIRVLEIYAGFEGISTLVDVGGGNGQNLKMIISKYPSIKGINFDLPQVIENAPLLSGVEHVGGDMFARVPEGDAMILKVVLHNWSDEKCVEILSNCHKALSGNGKVIVLEIIMPEEPEATEESQLISCLDNLMFISAGGKERTEKQYENLCKLAGFSKFHVACRSSSGPGVMEFYK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02970 362 Gene3D Vaccinia Virus protein VP39 117 362 IPR029063 -
Viun7g02970 362 SUPERFAMILY "Winged helix" DNA-binding domain 12 113 IPR036390 -
Viun7g02970 362 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
Viun7g02970 362 PANTHER O-METHYLTRANSFERASE 20 353 IPR016461 GO:0008168
Viun7g02970 362 Pfam O-methyltransferase domain 138 343 IPR001077 GO:0008171
Viun7g02970 362 Gene3D - 3 113 IPR036388 -
Viun7g02970 362 FunFam Caffeic acid 3-O-methyltransferase 3 113 - -
Viun7g02970 362 PIRSF O-mtase 3 362 IPR016461 GO:0008168
Viun7g02970 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 351 IPR029063 -
Viun7g02970 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 362 IPR016461 GO:0008168
Viun7g02970 362 FunFam Caffeic acid O-methyltransferase 116 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02970 Viun-Chr7 32716264 32717829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02970 7 362 Monolignol Biosynthesis Gene Families AT5G54160 44.538 3.20e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02970 - - gmx:100798347 526.554