Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02950 ATGGGGAGGAAAGGGTGGTTTTATTCAGTGAAGAAAGTTTTCTTTTCTGATTCCAAAAAGGAACAGAAACATTCTCCTCATCATCAACAACAACATCATCCCAAGCCACCAAAGTTAGGATGTTTTGGGGCTTATCACCCCGATGATCTAGAAGGAGCACCAGTTGCTGTTGTTCCCTCACTTCCACCAAGAAAAGAAGAGACCTCACCAAAAAGTGTGCCAGAGAATGAACAGAACAACCAAGCCTTTTCTTTGGTTTTGGCTACTGCTGTGGCTACAGGTGCTGCTGTTGCCGCTGCTGCAGAGGTTTCTCGTCTCTCAAACGCAAGTCGTAAAAGTGTAATATCGAATGAAGACATGGCTGCTACCAAAATTCAAACAGCATATCGTGGATATTTGGCAAGAAGATCCTTGCGAGGCTTGAGAGGTTTGGCGAGGTTGAGAACATTGGTGCAAGGGCAATCTGTTCAAAGACAAGCAGCTACTACCTTGCAATGCATGCAAACGCTTTCACGGTTGCAGTCTCAGATTCGTGCAAGGAAGGTCAGAATGTCCGAGGAGAATCAAACTCTTAACCGACAACTGATGCAGAAACGTGAAAGGGAATTTGACAAGTTGCAAGCTAACCAAATTGGAGAAAAATGGGATGATAGCTCGAAATCAAAGGAGGAAGTTGAGGCAAAGTTGTTGCAAAGGCAAATAGCAGCTATGAGAAGAGAGAAGGCTATGGCATATGCATCAACACATCAGCAAACATGGAGGAACTCTGCAAAATCTGCCACAAATGCTACATTTATGGATCCAAACAATCCTCACTGGGGTTGGAACTGGCTAGAGCGATGGATGGCTACTAGGCCATGGGAAGATCAAAACACAACCTACCACATTGGTCATGCATCTGCAAAAAGTGCTGCAAAAAACACCATGTCAGTGGGTGAAATCACAAAACTATACTCTCTCCGTGACCAGAACAATGATGTGAAATCACCATCAGCAACCAAAAAAGCAACTCGTACTGGCAGCATGGAATCCCCTCCAAAAAGAACCGGAAGAGCCTCACTGTCGAATGGAACAAGGCCAAAGGTATCAACTGGTTCATGGGGTGGTGATGCTGATTCAAAATCCATGTTCAACAAAGTCCACGAAAACAATCGCAGGCACAGCATTGGAGTGTCACCACTGAACGATGACGAGATCCATTCAAGCTCTTCACCATCCACCCAGGTTGCAAAGGCGAAGCCATCATCCAAAGGAAGAAGTGCATCACAAAGAAATACAACACCCGAAAATGCAGCAGCTTCTGCTCCTCTAAAGAAGAGACTCTCTTTCCCTGCTTCTCCAACTGGTGCAAGAAGGCATTCTGTTTCAACCAGACCGGGAAATGTGGTTTCTTCCAGCAACAGAAAATGA 1410 0.4518 MGRKGWFYSVKKVFFSDSKKEQKHSPHHQQQHHPKPPKLGCFGAYHPDDLEGAPVAVVPSLPPRKEETSPKSVPENEQNNQAFSLVLATAVATGAAVAAAAEVSRLSNASRKSVISNEDMAATKIQTAYRGYLARRSLRGLRGLARLRTLVQGQSVQRQAATTLQCMQTLSRLQSQIRARKVRMSEENQTLNRQLMQKREREFDKLQANQIGEKWDDSSKSKEEVEAKLLQRQIAAMRREKAMAYASTHQQTWRNSAKSATNATFMDPNNPHWGWNWLERWMATRPWEDQNTTYHIGHASAKSAAKNTMSVGEITKLYSLRDQNNDVKSPSATKKATRTGSMESPPKRTGRASLSNGTRPKVSTGSWGGDADSKSMFNKVHENNRRHSIGVSPLNDDEIHSSSSPSTQVAKAKPSSKGRSASQRNTTPENAAASAPLKKRLSFPASPTGARRHSVSTRPGNVVSSSNRK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02950 469 MobiDBLite consensus disorder prediction 449 469 - -
Viun7g02950 469 PANTHER IQ-DOMAIN 5-RELATED 1 448 - -
Viun7g02950 469 MobiDBLite consensus disorder prediction 387 469 - -
Viun7g02950 469 SMART iq_5 117 139 IPR000048 GO:0005515
Viun7g02950 469 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Viun7g02950 469 Gene3D iswi atpase 116 142 - -
Viun7g02950 469 MobiDBLite consensus disorder prediction 18 78 - -
Viun7g02950 469 MobiDBLite consensus disorder prediction 395 432 - -
Viun7g02950 469 MobiDBLite consensus disorder prediction 322 371 - -
Viun7g02950 469 Coils Coil 220 240 - -
Viun7g02950 469 Pfam IQ calmodulin-binding motif 120 139 IPR000048 GO:0005515
Viun7g02950 469 Coils Coil 181 201 - -
Viun7g02950 469 MobiDBLite consensus disorder prediction 322 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02950 Viun-Chr7 32593817 32596775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02950 1 447 IQD Protein Family AT5G03040 40.217 2.72e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02950 - - vun:114190307 846.269