Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02938 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAGTCGCTTGGGTCAGTCGCCAGATGGAGGGATTCCTCGCACCACCGCGACTTCAATCGCTGGGGATCCGCCGAGTTTCGCAGACCGCCAGGTCATGGTAAGCAGGGCGGTTGGCACCTGTTTTCCGAGGACTCAGGTCATGGGTATGCGATTTCTCGGTCAAGCAGTGACAAGATCCTGGAGGAAGATAGTCGGCCCTCGATTTCACGAGGTGATGGGAAGTACGGCAGGAGCAGTAGGGAAAATAGAGGACCCTTTGGTCAGAGAGATTGGAGAGGGCATTCGTGGGAACCCTCCAATGGTACCGTGAATTTGCCCAGAAGGCCGCAGGATGTGAACAATGACCAGAGGGCTGTGGACGACGCCCTAGGATACTCTTCTCATCCACATTCCGATTTCGGGAACTCTTGGGATCAGCATCATCTGAAAGACCAGCATGAGAAGATAGGTAGTGTCAATGTGTTGGGAACTGGCTCCAGAAGTGATAGAGAGAACTCTCTGGGTGACTGGAAGCCGCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGCAGCGGATTCGCATGAAGAGAAGCCTGAGTTGCAACCGAAAAGTGCAGCTGCTAATGAGTCACATTCAGGGGAAGCCGCTGCTTGTGCGACATCTTCTGTGCCTTCTGAAGATACGGCTTCTAGAAAAAAGCCAAGGCTGAATTGGGGCGAGGGACTTGCAAAGTATGAGAAGAAAAAAGTCGAGGTGCCTGATGCAAGTGCAAACAAAGATGGTCCCGTCTTGTCTGCTAGTATCACCGAACCTTGTAATTTCCTCAGTACCAGCTTAGTTGACAAAAGTCCAAAAGTTACAGGATTTTCTGAATGTGCATCTCCTGCAACTCCATCTTCTGTCGCCTGCAGTTCCTCTCCTGGTATGGATGATAAATTATTCGGAAAGACTACAAATGTAGACAATGATGTTAGTAATTTGACTTGTTCACCCGCTCCTTTGTCTGAAAATAATTTGCAGAGGTTTTCCTTTAACTTAGAGAAATTTGATATTGGCTCCTTGAATAATTTGGGCACTTCAATTATTGAGTTGGTACAATCTGATGATCCAACTTCTGTAGATTCTGGTCCAATGAGGTCCAATGCAATTAATAAGTTACTGATATGGAAAGCTGACATTTCAAAGGTGTTGGAGATGACCGAATCTGAAATAGATTTACTTGAAAATGAACTGAAGTCGCTGAAATCTGAATCTGGTGTTACATGTCCATTTGCGGTATCCCTGGGCTCCCAGATGGTAGGTAGTGGTGAAAAATCCTGTGAAGGACATGCTGGAGTCTCTGACCAGGTCATCCGGCCAGTACCGTTGAATATTGTTGATGATGCCAATATGGAGAAGGTGCCACTTTCAACTAATTTACACAGTGTTCATGAAAATGTAAAGGAAGAGGATATTGATAGTCCTGGAACAGCTACTTCTAAATTTGTTGAGCCTCTGCCTTTAATTAAAGCAGTTTCTTGTGGTACTGGAGGATATGTTAATTTCTCCCAGGACTTGGATTCTGTTCCATCTGCAGCTGTGAAATGCTTAATTCCCTGTAGTGCTAGGAAAGATGTTATTGTACCTTGTGTTGATGACAAGACTTCTTTGGAGGTAAACGATAGCATGGATATTTTATGTGGTACAATTATTTCTTCTAATAAAGAATCTGCCAACAAAGCTAGTGAGGTGTTTGATAATTTATTGCCCAAAGATTGTTGTAAGATTGGGAGGATGGGAGCCAGCAGTGACACATGCAATCAGACCTTGATTAGGGAAAAGTTTGCAGAGAAGAAGCGATTTGCTAGGTTTAAGGAGAGAGTTATTGCGCTTAAGTTCAGAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCTTACTTTCTATAAGGAAATGCCGACCAAAATCTCACAAAAAGAATGAACTAAGTGTGCGAACTACCTGTAATGGTAACCAGAAGAACCGATCATCCATTCGATCACGTTTTCCCTTTCCTGCAGGAAATCATCTGAGCTTGGTTCCAACATCAGAGATGATTAATTTTACAAGCAAACTGCTTTCAGAATCTCAAGTTAAAGTGCAGAGGAACACTTTGAAGATGCCAGCTTTAATTTTGGATGAAAGAGAGAAGACGATTTCAAAGTTTGTAACTAGTAATGGGCTGGTTGAAGATCCATTGGCTATTGAGAAGGAAAGGGCTTTGATTAATCCTTGGACACCACAGGAGAGAGAAGTTTTCTTGGAGAAATTTGCCGTCTTTGGAAAAAATTTTAGGAAAATTGCTTCTTTTCTTGACCACAAGACAACTGCTGACTGTGTTGAATTCTACTACAAAAATCACAAATCTGATTGTTTTGAGAAACTTAAGAAGCAAGATGTTGGTAAGCTGGGGAAGTCATTTTCAGCTAAAACTGACTTGGTGGTATCAGGTAATAAAAAAATCCGTGCAGGAAGCTCACTTTTGGGTGGATATGGTAAAGCGAAGACGTCGAGGGTCGAAGACTTCATTGAGAAATCAGGCAGTTTTGACATTCTTGGGGATGAAAGAGAAACTGCTGCTGCGGCTGATGTATTGGCAGGAATATGTGGTTCTCTTTCTTCCGAGGCTATTAGTTCCTGCATAACAAGTTCTGTTGATCCAGTAGAAGGTAGCAGGGATAGGAAGTTTCTGAAAGTAAACCCTTTATACAAGCTGCCCTTGACTCCTGATGTTACTCAGGAGGTTGATGATGAGACTTGTTCGGATGAGAGCTGTGGTGAAATGGATCCTACAGACTGGACTGATGATGAGAAGGCTGCCTTTCTTCAGGCTGTGTCTACTTTTGGGAAAGATTTTGCCAAGATAGCTCGGTGTGTTGGGACAAGGTCCCAAGAACAGTGCAAAGTTTTCTTCAGCAAAGGCCGCAAATGTCTTGGATTGGATCTCATGCGCCCAATACCTGAAAATGTTGGATCCCCAGTGAATGATGATGCAAATGGGGGTGAGAGTGACACTGATGATGCATGTGTCGTGGAGACAGGCTCAGTGGTTGGAACTGAAAAGTCTGGCACTAAAACAGATGAGGACCTGCCTTTGTATGGAACAAACACGTTCAATGATGAGTCCAATCCTGTGCAAGCTAGGAACCTGTCAGCAGAGTTAAATGAATCAAAGGGGACTGATGGGACAGAAGTAGATATTGAAGATGCAAATGTGGTTTCTAATGCATGTGCAATTGATATTGATTCTATACAGGGATGTGATCGTAGTGAATTTGCCTTGTGTGGTTCTGTCAGTGGACAAACAACTGTAATCTTGTCGGATAGCACAGAAATTAGAAGAGATAAAGCTAATAAATTGGGAGGTGCTACAGAGTTGATATCTGTTCCAGATACAAGTGAACCATGCGAGAGTAATTCTTTTGTTGAGGATAGAATGGTGGTTTCCGAGGTTTCTTCCGGAAGACCTGGAAATGAATTGGAGAGGCAAAGAGTGTCTTCACCCCGATATCTTGATGATAGAGATAGTAAACAGGAAGCTGATTCGGGTGTCATAGTTGATTTGAAAAGCCCTGTGCACATTCTAAGCACTATGGTAAATGCTCCTGTCTCATCATTTGGAAATTCCTGTTCTGGATTGAGTTCTAGTACTGAAAATAAGCACGTACCCATCGGAAAGCCTCATGCCTCCCCGTTGTCTGTGGACGAACATCAAGCATCTTCAAATTCATTTTTACAAAATACTGTTGCTTCTGATATTCAGTGTGAGAAAACAGCTAGCCAAGATCGACTGTCTTCTACCTGTGATATTCAGGTTAGCAACGATGAGCAGCCCCCTATTACTGGGAATTCTTCAGACCATGTTGATGCCGGAAGCATTCTCCAGGGCTATCCCTTGCAAGCTCCCATTAAGGAGATGAATGGTGATTTGAACTGTAGCAGTTCAGCAACAGAATTGCATCTTTTGTCCCAGAAGATCGAACAACCTGATGATCAAGCCAAAAAATTACAGTCATTGGATTCAGATAAAACATCCAGAAATGGTGATGTCAAACTTTTTGGGAAGATACTAACCAATCCTTCATCAGCACAAAAAGCTAATGTAGGTGCTAAAGGTAGTGAAGAAAATGGTACCCACCATCATAAGTTCAGCAAACCTTCTGGTATGAAATTTACCGGACATAATGGTGATGGGAATTTGAAAATTTTGAAGTTTGACTGTAATGATTATGTCGGCCTTGAAAATGTTCCCATGCGGAGTTATGGTTATTGGGATGGGAACAGAATACAGACTGGTCTCTCATCCTTGCCTGATTCTGCTATCTTGCTAGCCAAGTATCCTGCAGCCTTCAGTAATTATCCCACATCTTCTGCCAAATTGGAGCAACCGTCATTGCAAACATTTTCGAAGAATAATAATGAACGGCTCCTAAATGGCAGTAATGCCGTGATTGATTATCAGATGTTTAGAAGGGATGGTCCGAAAGTGCAGCCATTCATGGTAGATGTGAAGCACTGCCAGGATGTATTCTCTGAGATGCAGAGAAGAAATGGTTTTGAAGCAATCTCAAGTTTACAGCAGCAGAGCAGGGGAGTGATGGGAATGAATGGGGTTGGAAGACCGGGGATTCTTGTAGGAGGATCGTGCAGTGGTGTCTCAGATCCTGTGGCAGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGTGGTCAGTCTGGGAGTATTGCGAGAGAAGATGAATCTTGGGGAGGGAAGGGGGATTGA 4878 0.4356 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEDSGHGYAISRSSSDKILEEDSRPSISRGDGKYGRSSRENRGPFGQRDWRGHSWEPSNGTVNLPRRPQDVNNDQRAVDDALGYSSHPHSDFGNSWDQHHLKDQHEKIGSVNVLGTGSRSDRENSLGDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGAADSHEEKPELQPKSAAANESHSGEAAACATSSVPSEDTASRKKPRLNWGEGLAKYEKKKVEVPDASANKDGPVLSASITEPCNFLSTSLVDKSPKVTGFSECASPATPSSVACSSSPGMDDKLFGKTTNVDNDVSNLTCSPAPLSENNLQRFSFNLEKFDIGSLNNLGTSIIELVQSDDPTSVDSGPMRSNAINKLLIWKADISKVLEMTESEIDLLENELKSLKSESGVTCPFAVSLGSQMVGSGEKSCEGHAGVSDQVIRPVPLNIVDDANMEKVPLSTNLHSVHENVKEEDIDSPGTATSKFVEPLPLIKAVSCGTGGYVNFSQDLDSVPSAAVKCLIPCSARKDVIVPCVDDKTSLEVNDSMDILCGTIISSNKESANKASEVFDNLLPKDCCKIGRMGASSDTCNQTLIREKFAEKKRFARFKERVIALKFRALHHLWKEDMRLLSIRKCRPKSHKKNELSVRTTCNGNQKNRSSIRSRFPFPAGNHLSLVPTSEMINFTSKLLSESQVKVQRNTLKMPALILDEREKTISKFVTSNGLVEDPLAIEKERALINPWTPQEREVFLEKFAVFGKNFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQDVGKLGKSFSAKTDLVVSGNKKIRAGSSLLGGYGKAKTSRVEDFIEKSGSFDILGDERETAAAADVLAGICGSLSSEAISSCITSSVDPVEGSRDRKFLKVNPLYKLPLTPDVTQEVDDETCSDESCGEMDPTDWTDDEKAAFLQAVSTFGKDFAKIARCVGTRSQEQCKVFFSKGRKCLGLDLMRPIPENVGSPVNDDANGGESDTDDACVVETGSVVGTEKSGTKTDEDLPLYGTNTFNDESNPVQARNLSAELNESKGTDGTEVDIEDANVVSNACAIDIDSIQGCDRSEFALCGSVSGQTTVILSDSTEIRRDKANKLGGATELISVPDTSEPCESNSFVEDRMVVSEVSSGRPGNELERQRVSSPRYLDDRDSKQEADSGVIVDLKSPVHILSTMVNAPVSSFGNSCSGLSSSTENKHVPIGKPHASPLSVDEHQASSNSFLQNTVASDIQCEKTASQDRLSSTCDIQVSNDEQPPITGNSSDHVDAGSILQGYPLQAPIKEMNGDLNCSSSATELHLLSQKIEQPDDQAKKLQSLDSDKTSRNGDVKLFGKILTNPSSAQKANVGAKGSEENGTHHHKFSKPSGMKFTGHNGDGNLKILKFDCNDYVGLENVPMRSYGYWDGNRIQTGLSSLPDSAILLAKYPAAFSNYPTSSAKLEQPSLQTFSKNNNERLLNGSNAVIDYQMFRRDGPKVQPFMVDVKHCQDVFSEMQRRNGFEAISSLQQQSRGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKYGGQSGSIAREDESWGGKGD 1625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02938 1625 CDD SANT 970 1008 IPR001005 -
Viun7g02938 1625 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 855 1622 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 1 266 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 1399 1419 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 78 112 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 1186 1219 - -
Viun7g02938 1625 ProSiteProfiles SANT domain profile. 968 1008 IPR017884 -
Viun7g02938 1625 SUPERFAMILY Homeodomain-like 765 825 IPR009057 -
Viun7g02938 1625 Coils Coil 421 448 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 198 220 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 1251 1277 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 8 45 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 117 133 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 156 170 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 1055 1080 - -
Viun7g02938 1625 ProSiteProfiles SANT domain profile. 777 828 IPR017884 -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 1202 1219 - -
Viun7g02938 1625 Pfam Myb-like DNA-binding domain 969 1008 IPR001005 -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 1066 1080 - -
Viun7g02938 1625 MobiDBLite consensus disorder prediction 1605 1625 - -
Viun7g02938 1625 SMART sant 966 1014 IPR001005 -
Viun7g02938 1625 SMART sant 778 826 IPR001005 -
Viun7g02938 1625 SUPERFAMILY Homeodomain-like 967 1016 IPR009057 -
Viun7g02938 1625 Gene3D - 943 1021 - -
Viun7g02938 1625 Gene3D - 758 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02938 Viun-Chr7 32539630 32547905 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g02938 Myb_DNA-binding 7.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02938 - - gmx:100810588 2675.58