Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02901 ATGTTTAAGGTTATGGAAAACATGGAGAGGGGTTCAGAAAGGTGCTTAGATTCTCAACTGTGGCATGCCTGTGCTGGTGCCATGGTTCAAATGCCACCTCTCAACACAAAAGTCTTTTACTTTCCCCAGGGCCACGCGGAACACGCTCATGGGAAAGTAGATTTTGGCCAAACCCGGGTTCCACCACTCGTCCCTTGCAGACTCTCTGCCATGAAATACATGGCAGACCCTGACACAGATGAGGTGTATGTCAAAATGAGGCTGATCCCTTTGAGGGAACATGAATTGGATTTGGAGGATGATTGTTTCTTGGGGAACACTGGAGCGGAGGGTCAAGAGAAACCTCCTACCTCTTTTGCCAAGACACTCACACAATCTGATGCCAACAATGGTGGAGGTTTTTCTGTGCCTCGTTACTGTGCAGAAACCATCTTCCCGAGGTTGGACTATTCAGCCGAGCCTCCAGTTCAGACAATCATCGCCAAGGATATGCATGGACAGTGCTGGAAGTTCAGGCATATCTATAGAGGAACGCCTAGGAGGCATCTTTTGACCACAGGATGGAGCAATTTTGTGAATCAGAAGAGGCTTGTTGCTGGGGACTCCATTGTGTTTCTGAGGGCAGAAAACGGGGATCTTTGTGTTGGGATAAGGAGGGCTAAGAAGGGGATTGGTGGAGGGTCTGAGTTCTCTTCCGGATGGAACCCTCTCTTTGGTGGGGTTTCTGGATTCTTGTGTGGGAGTGAGAACAACATGATGGGTGGTGCAAAAGGCGGTGGTGACGAGATGGTGGGAAGAGTGGCTGCTGAATCTGTTCTTGAGGCCGTAGCTTGTGCTGTCAATGGTAGGCCCTTCGAGGTTGTGTACTATCCAAGGGCTAGTTCCCCTGAGTTTTGTGTTAAGGCTTCTGTTGTGAAGGCTGCAATGCAAATTCAGTGGTGTTCTGGGATGAGATTCAAAATGCCCTTTGAAACTGAGGATTCTTCCAGGATTAGCTGGTTCATGGGCACCATTTCTTCTGTTCAGGTTGCAGATCCCATTCGTTGGCCTGATTCTCCTTGGCGTCTTCTGCAGGTGGTATGGGATGAACCAGATTTACTTCAGAATGTGAAGTGTGTAAACCCTTGGCTGGTTGAACTAGTCTCTAACATGCCCAGCTTCAATCTCTCTGCATACTCACCTCCTAGGAAGAAACAACGCTTCCTAAATGACCCATATTTTCAAGTCATCAACCAACTTCCAATGCCATCTTTCTCTAGCAATCTTCTGAATTATACCAACTCTCTTTGTAACATTGAAAATAATAGTTCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGACTATCTCCATCTGATTTTCCCTTCAACAAGCTCCCAGCAGACATGCTTCTAGGTGGTTTCTCTAGGCTTGACCATGCAACAAAACCTGTTAGGCCTCCTTGTGGAACCTATAAGAACACCACTTCTAATACTACCACTAATAAGACCAATGTTGACATATCTTGTCTGTTGACTGTGGGAAATCCCAACCCGAATTTTAAGGAATTGAATGCAACAAAAGCACCCCACATCTTGTTATTTGGAAAACTTATTCACACCGAGCAACACTGTTCAAACACCAGCTCTGCAAGTACAACTGGGAATAGTGTGTCTGAGGGGAATTCGCTCAAGACTTCTAATGCTTCTGATGGCCTAGGTTCTGCTTTGCACCAAAATAGCCCAATTGAGAATAACTCTGATGGAGGGTCTCCCTGGTACAAGGATCAGCACAAGGCTGATCTGGGATCCGACAACGTTAACACGTTATGCATTGCTTTGTAA 1827 0.4663 MFKVMENMERGSERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKVDFGQTRVPPLVPCRLSAMKYMADPDTDEVYVKMRLIPLREHELDLEDDCFLGNTGAEGQEKPPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGSEFSSGWNPLFGGVSGFLCGSENNMMGGAKGGGDEMVGRVAAESVLEAVACAVNGRPFEVVYYPRASSPEFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNMPSFNLSAYSPPRKKQRFLNDPYFQVINQLPMPSFSSNLLNYTNSLCNIENNSSAGIQGARHAQFGLSPSDFPFNKLPADMLLGGFSRLDHATKPVRPPCGTYKNTTSNTTTNKTNVDISCLLTVGNPNPNFKELNATKAPHILLFGKLIHTEQHCSNTSSASTTGNSVSEGNSLKTSNASDGLGSALHQNSPIENNSDGGSPWYKDQHKADLGSDNVNTLCIAL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02901 608 Gene3D - 313 386 - -
Viun7g02901 608 MobiDBLite consensus disorder prediction 111 126 - -
Viun7g02901 608 MobiDBLite consensus disorder prediction 540 586 - -
Viun7g02901 608 MobiDBLite consensus disorder prediction 540 593 - -
Viun7g02901 608 Gene3D - 117 221 IPR015300 -
Viun7g02901 608 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 563 IPR044835 GO:0003677|GO:0006355|GO:0009725
Viun7g02901 608 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Viun7g02901 608 Pfam B3 DNA binding domain 119 220 IPR003340 GO:0003677
Viun7g02901 608 FunFam Auxin response factor 117 221 - -
Viun7g02901 608 MobiDBLite consensus disorder prediction 107 126 - -
Viun7g02901 608 CDD B3_DNA 118 219 IPR003340 GO:0003677
Viun7g02901 608 SMART B3_2 119 221 IPR003340 GO:0003677
Viun7g02901 608 FunFam Auxin response factor 313 386 - -
Viun7g02901 608 Pfam Auxin response factor 276 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Viun7g02901 608 SUPERFAMILY DNA-binding pseudobarrel domain 112 220 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02901 Viun-Chr7 32272686 32276019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02901 1 594 B3 DNA Binding Superfamily AT4G30080 56.033 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Viun7g02901 B3 2.6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02901 - - ccaj:109810654 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02901 7 32272686 32276019 Viun7g02901 7 32272686 32276019 ECH