Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02889 ATGGGTAGTGTTGAAATCCCCAATTGGCTGAAAGGGTTGCCACTGGCCCCAGAGTTTCGCCCTACGGACACCGAATTTGCTGACCCAATTGCTTACATTTCAAAGATTGAGAAGGAAGCTTCCAGCTTCGGGATTTGTAAGATTATCCCACCATTGCCCAAACCTTCAAAAAAATATGTTTTCTCTAATTTGAATAGGTCACTTTTGAAGTGCCCGGATTTGGGTCCAGATAACAGTTCATTAGGCGTCTGTAATTCATTGAAAACCGGTTCTGGGGATGGTAGTAGTGATGGGGTGTCTCGAGCTGTGTTTACGACAAGGCATCAAGAACTAGGGCAGAGTCAGAGTGTGAAAAAAGCCAAAGGAATTATTCAGAATCCACAGCCAGGTGTTCATAAGCAAGTATGGCAAAGTGGGGAGGTTTATACTCTGGAACAGTTTGAGTCTAAATCGAAGTCTTTTGCAAGAAGCTTGCTAGGGTCGGTGAAGGATGTTTCTCCGCTGGTTATAGAGTCTATGTTTTGGAAGGCAACTTTAGAAAAGCCCATATATGTGGAGTATGCCAATGACGTGCCTGGGTCTGCTTTTGAAGAGTCAAAGGGTCAATTTCATTATAGTCATAGAAGGCTGAGAAAAAGGACTTATTATAAGAGTAGGCTAGATAGCTCTGATTGTAAACAAACTGTAATGGGTTGCGGAAGAGATACCCAAACTGATGAGACTAAGGGTGCTTCTGTCCAAAGTGACGCTGACAAATGTTTACGGATGACCAAATCAGTTGATACTGTGTCAACATTTTCATCGAATGACGATTCACAATCTTTTAAAGAAAAGAGTTCAGATACCGGCAATGATATGCAAGGCACTGCTGGTTGGAAGCTTTCAAACAGTCCCTGGAACCTGCAAGTTATTGCACGATCGTCTGGCTCATTGACACGTTTTATGCCGGATGATATTCCTGGTGTCACTTCACCTATGGTATACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCACGTAGAGGATCATGAGCTTCACAGCTTGAATTTTCTTCACACTGGCTCATCAAAGACATGGTATGCTGTTCCTGGAGATTATGCGTTTGCTTTTGAGGAAGTCATACGCACTGAGGGTTATGGTGGTGATGTTGATCATTTAGCCGCTTTGAAACTTTTGGGTGAAAAAACAACTCTTTTGTCACCTGAGGTAATTGTTGCATCTGGAATTCCTTGTTGCAGGTTGACACAGAACCCTGGTGAATTCGTTGTGACTTTTCCGAGAGCTTATCATGTAGGATTCAGCCATGGTTTTAACTGTGGGGAAGCTGCTAACTTCGGAACTCCACAATGGCTTAGAGTAGCCAAGGAAGCTGCAGTTCGGAGAGCTGCAATGAACTATCTTCCCATGCTTTCCCATCAGCAACTGCTTTACTTACTGACCATGTCTTTTATTTCAAGAGTTCCAAGAACACTATTACCTGGGGTGCGCAGTTCTCGATTGAGAGACCGTCAGAAAGAAGAAAGGGAGTTTTTAGTAAAACAGGCTTTCATAGAAGACATGCTACAGGAAAACAAGCTGCTATCCATTCTTCTTGGAAAGGAAGCTGCTAAAAGAGCTATTCTATGGAATGCTGATTTGTTGCCAGATTCCGGCAAAGGTTTTCAGTTACATGGTTTAACTTCTACAACTGGAACCTCTGTGGAAAACATGTCAAATATTAGTTCTGCCGAAAAAAGTGGTCATTATATGCTTGATGATGAGATGAGTTTGTATATGGATTCTTTGACTAATATAGATATTGGTGGTGATGATCTTCCCTATCACTTCGAAACTGATTCCGGAGCATTGGCTTGTGTGGGTTGTGGAATCCTTGGTTTTCCATTTATGGCTGTGATACAACCAACTGAGAAATTGACAATGGAACTTCCTGATAATCATCTAATTCAAGTTTCCTCTCCGGACTCTACTGCTGGTCTTCATAGTTCCATATCACGGGATCTTTCTTTTTCTGGACTTTCATCAGTAAAGGAGATGCCAGATCAATCATTAAATAAGTGCAGTAAATGTTGGAATACGTCCAGTAAATTTTTTAGGCCTCGGATTTTCTGCCTGGGGCATGCTGTTCAAATAGTAGATATGTTGCAGAGCAAAGGTGGAGCCAATGTGCTTATAATTTGCCATTCAGACTATCAGAAAATAAAGGCACATGCCAGGGAAGTTGCGGAAGAGATACACGGTGCTTTTGATTATAATGAGGTTCCATTAGATACAGCATCCCCAGAAAATTTGACCCTGATAGATCTGGCTGTTGATGGTGAAGAGCTTGATGAATGTGAAGACTGGACATCAACACTAGGCATTAACCTACGGAATTGGGTCCATACAAGAAATAATGCTCCTTCTAATCAAGTTCCTTGGACGCTTGGGAGATTGTTCCATGATAAATGTCCTGCTTCAAATATTTTAGCTTTAAATTGGCAGTCTCGGAGATTTCGGTCGAAAAGGTCAAGCCATTTAGCTCAGACTAAATCCTCTCACAGCATTGAGAGAAAGAAGGATGATCAGTCGGGTGGAAGAATAAATGACTCCACTGGGGACAAGAAGCTAATTCAATATGCAAGAAAGAAGTTCAAGTCAAAGCAAAGTTTCCCTGTAGTAAGCATGGTCTGTGAACTCCAAGAGAAGTCCCAAAAAGTGTCTGCTACTTTAAGTGCGGAACATAATAATTGTGTTTCTGAAACTCTTCAAACTGAGGATTTAAGGACCGAGGGTGCATTGCCATGTGCTTCTGCTTGTACTGAAATGTCTGCAATGCATCCTGAAATCCAGATTGCTGAAATGCCCATTAGCACGAATATGAGTGCTGCTAAGTCACAACCTTCAAATTCCATTCTTGATCGTGTTTTAATGATTGATAAAGCTGGAGCACAGATTGAGAATCAAACCATGCAGGAATCATATGTAGACAGAAATAATGATTTAACACCCAGTCATTCCAAGATGCACTACAATACCAGTGTCTCAGAAATATGTAGCAAGGAGAGCCAGGATTGTCAGGACAAGAAATGTTCTAGCACACTTTCAGATGCACCAGATGGAAATATTGAAATGATTAAAAAAACTGAAATTGCAGAAGCAGTCATCATTGATAGCCACTGTAATAGGTTAACATTGGATGATCAAGGGCATCAAGAATATCAGTCTACCAACAAAAGCAACAATGAGGAAGCTGCTGTATCAACTGCTTCAATGGTAAATCAATCTACACTTACTTCTGTGGATGGAAAAGTTGAAAGTCCAAATAATAATCATATCTCAGAAAGAATTAGGAGTCCTATTTTCCTAGAAAAAACAACTGAGGAAGGAATTGATTCTATAAGTAAAATGGACAAGGAGCCTCGAATTGATGAAAGACCAATTAGCAAACATACTCCAAACGAAGTTTGTGAAGTTCGAAGAGAGATTTTTGCTTCTGTAGACTTGCATAATAACGGAATCTTGGATGATGAGCAACAAGTAACTCAGGGTGGAAAAAATAGCAAAAGGGAAATAACTCATGTTTCAACTGAACAATGTTGTCCATCGTCTGTGCAGTGTCAGATTGAAAATGCGAATAAAATTAATGAGGGCCCTGTTTGCAGTTATGCTGCAGAAGGTGAAAATAAAAGCGTAACTTCAATAGAGTTAGGATGTTCTGAAGTTTCAGGGGAAGCCTGTCCTAACAAAGACTCCTGTATGCAATTTTTTCCGGATAAAGAAAAAGAAATGAAAAACCAGTCGGTTAATAGAATTGATGAGGAACTTTTCTCTGGCACGGATACATCGATAAAAGACTCTTCTCTGTCAGTGCAGGAATGCTCAAAAATTGAGAACGAGATTTATGTTACAGAAAAGATAAATGAAAACAAAGCTGATTTGTCACATTATAAAAGGGGGCTGGAGAGTTGTGAGTTAGCTACAGAAGTTCCCAGATTAAATTCCGGGAAGAAAAAAATGAGGAAAGTGGAACGAACAAGGAACCAATCTAATTCTGACAACTTTATTAGAAGTCCATGTGAGGGGCTGAGGCCAAGAGCTGGGAAGATTGCCGCTGAAAAAAGTAGAGTGGAAATCAACCCAGTTGACAAGGAAAATCAGGTGGCTAAACGGGCAAGGAGATCTTCTGAAGTTTTGGTTCCTCGCAAAAATAAAAAAGATGGTGTTAAAAAGTCCCACAAGTGCGACCTCGATGGTTGCCGAATGAGTTTCAAGACTAAGGCAGAGTTACTGTTGCACAAACGAAACCTTTGCCCACATGAAGGGTGTGGTAAGAAGTTCAGTTCCCACAAATATGCTTTACTTCACCAGCGAGTTCATGATGATGAGAGGCCCCTTAAGTGTCCATGGAAAGGTTGTTCCATGTCGTTCAAGTGGGCTTGGGCAAGGACAGAGCACATACGCGTACATACTGGGGAGAAGCCTTATCACTGCAAGGTGGAGGGATGCGGCCTTTCATTCAGGTTTGTATCTGATTTTAGCAGACACAGACGGAAAACGGGACACCATGTGAAACCTCCTGCTTGA 4563 0.4122 MGSVEIPNWLKGLPLAPEFRPTDTEFADPIAYISKIEKEASSFGICKIIPPLPKPSKKYVFSNLNRSLLKCPDLGPDNSSLGVCNSLKTGSGDGSSDGVSRAVFTTRHQELGQSQSVKKAKGIIQNPQPGVHKQVWQSGEVYTLEQFESKSKSFARSLLGSVKDVSPLVIESMFWKATLEKPIYVEYANDVPGSAFEESKGQFHYSHRRLRKRTYYKSRLDSSDCKQTVMGCGRDTQTDETKGASVQSDADKCLRMTKSVDTVSTFSSNDDSQSFKEKSSDTGNDMQGTAGWKLSNSPWNLQVIARSSGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHTGSSKTWYAVPGDYAFAFEEVIRTEGYGGDVDHLAALKLLGEKTTLLSPEVIVASGIPCCRLTQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLRVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRTLLPGVRSSRLRDRQKEEREFLVKQAFIEDMLQENKLLSILLGKEAAKRAILWNADLLPDSGKGFQLHGLTSTTGTSVENMSNISSAEKSGHYMLDDEMSLYMDSLTNIDIGGDDLPYHFETDSGALACVGCGILGFPFMAVIQPTEKLTMELPDNHLIQVSSPDSTAGLHSSISRDLSFSGLSSVKEMPDQSLNKCSKCWNTSSKFFRPRIFCLGHAVQIVDMLQSKGGANVLIICHSDYQKIKAHAREVAEEIHGAFDYNEVPLDTASPENLTLIDLAVDGEELDECEDWTSTLGINLRNWVHTRNNAPSNQVPWTLGRLFHDKCPASNILALNWQSRRFRSKRSSHLAQTKSSHSIERKKDDQSGGRINDSTGDKKLIQYARKKFKSKQSFPVVSMVCELQEKSQKVSATLSAEHNNCVSETLQTEDLRTEGALPCASACTEMSAMHPEIQIAEMPISTNMSAAKSQPSNSILDRVLMIDKAGAQIENQTMQESYVDRNNDLTPSHSKMHYNTSVSEICSKESQDCQDKKCSSTLSDAPDGNIEMIKKTEIAEAVIIDSHCNRLTLDDQGHQEYQSTNKSNNEEAAVSTASMVNQSTLTSVDGKVESPNNNHISERIRSPIFLEKTTEEGIDSISKMDKEPRIDERPISKHTPNEVCEVRREIFASVDLHNNGILDDEQQVTQGGKNSKREITHVSTEQCCPSSVQCQIENANKINEGPVCSYAAEGENKSVTSIELGCSEVSGEACPNKDSCMQFFPDKEKEMKNQSVNRIDEELFSGTDTSIKDSSLSVQECSKIENEIYVTEKINENKADLSHYKRGLESCELATEVPRLNSGKKKMRKVERTRNQSNSDNFIRSPCEGLRPRAGKIAAEKSRVEINPVDKENQVAKRARRSSEVLVPRKNKKDGVKKSHKCDLDGCRMSFKTKAELLLHKRNLCPHEGCGKKFSSHKYALLHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFVSDFSRHRRKTGHHVKPPA 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02889 1520 SMART JmjN_1 15 55 IPR003349 -
Viun7g02889 1520 SMART cupin_9 293 462 IPR003347 -
Viun7g02889 1520 ProSitePatterns Zinc finger C2H2 type domain signature. 1430 1452 IPR013087 -
Viun7g02889 1520 SMART c2h2final6 1488 1514 IPR013087 -
Viun7g02889 1520 SMART c2h2final6 1428 1452 IPR013087 -
Viun7g02889 1520 SMART c2h2final6 1458 1482 IPR013087 -
Viun7g02889 1520 SMART c2h2final6 1405 1427 IPR013087 -
Viun7g02889 1520 Pfam JmjC domain, hydroxylase 326 445 IPR003347 -
Viun7g02889 1520 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1454 - -
Viun7g02889 1520 MobiDBLite consensus disorder prediction 835 865 - -
Viun7g02889 1520 ProSitePatterns Zinc finger C2H2 type domain signature. 1460 1482 IPR013087 -
Viun7g02889 1520 ProSiteProfiles JmjC domain profile. 293 462 IPR003347 -
Viun7g02889 1520 SUPERFAMILY beta-beta-alpha zinc fingers 1429 1465 IPR036236 -
Viun7g02889 1520 Gene3D Classic Zinc Finger 1425 1514 - -
Viun7g02889 1520 ProSiteProfiles Zinc finger C2H2 type domain profile. 1458 1487 IPR013087 -
Viun7g02889 1520 SUPERFAMILY Clavaminate synthase-like 294 459 - -
Viun7g02889 1520 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Viun7g02889 1520 Gene3D Cupin 9 466 - -
Viun7g02889 1520 ProSiteProfiles Zinc finger C2H2 type domain profile. 1428 1457 IPR013087 -
Viun7g02889 1520 SUPERFAMILY beta-beta-alpha zinc fingers 1468 1518 IPR036236 -
Viun7g02889 1520 MobiDBLite consensus disorder prediction 844 861 - -
Viun7g02889 1520 Pfam jmjN domain 17 50 IPR003349 -
Viun7g02889 1520 ProSitePatterns Zinc finger C2H2 type domain signature. 1490 1514 IPR013087 -
Viun7g02889 1520 MobiDBLite consensus disorder prediction 264 293 - -
Viun7g02889 1520 FunFam Probable lysine-specific demethylase ELF6 1455 1484 - -
Viun7g02889 1520 ProSiteProfiles Zinc finger C2H2 type domain profile. 1488 1519 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02889 Viun-Chr7 32105710 32116488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02889 1 876 C2H2 Transcription Factor Family AT5G04240 54.698 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun7g02889 JmjC 9.6e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02889 - - gmx:100799861 2455.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02889 7 32105710 32116488 Viun7g02889 7 32105710 32116488 ECH