Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02888 ATGTGCAAATCCAGAAAGAGCACCGCCGCGACACAACCAGGAAGCAGACGAAGCACCAATTCAGATAGAAACATGACGAATTCCCCTCGTCCTCACCGGACGCAAACCCTAACATCGTCGTCGTCGAACTACGATACCTCCACCAGCGAAGTCCCCGTCACAGAATCAAGAAGCTACGTATTCGAAAACAACAACACCAATACCAATACCAACACCAATGACTTATTAGAGTGGTCAAAAACCTCTTCCATCTCAAGCCGCGCCTCTCTCTCAAGCCTCAAAGATACGCTCCCTGAAAGCCCTAACATCTACCACTTCTCAGAGATCTCCGCCGCCACCGCCAACTTCTCCGCCCCACGCCTCTCTTCCTCCTCCTGGCGCTGCCTAATCCGCCACCGCGATGTTGTTGTCTCTCGCCGCAACTTCCGCCGTCAAATCGACCTCCCGGAGCTATCCCGCCGCCTCGCCATCATCTGCCGGAGTCACCACAGCAGCCTCGTCAAGCTCCTCGGCGCCTCCGTCTCCGGCGCCGTCATCTTTCTCGTCTATGAATTTGTCCCCGGTGCCAGCCTCTCTGACTGCCTCCGCAACCGCCGGAACCCTAGCTACACCGATCTCGTCACGTGGACCTCTAGGATGCAGATCGCCTCCGACATCGCGCATGGCCTCGATTACATCCACAATTTCTCCGGTTCCGACTCCGGTTCGGGATCCGGTTCTGGTTTCGTTCATAATCACATCAAGAGTTCCAGCATTGTTATCACGGAGGATAATTTGCGCGCGAAAATCTGCCACTTCGGCTTGTCCGATCTCTGCGGCGAGGCAGTCGCCGGCGACCGTGGGGAATCAGGTGAGCGGAGGGTGAGGATCGAGGGGACGAGAGGGTATATGGCGCCGGAATTTCAGGTCAGCGGCGTAGCGACGAAGAAGACCGACGTGTACGCGTTCGGAGTGGTGGTTTTAGAGTTGCTGAGCGGGGAAGAGGCGGTGAAATTCGAATTCAACGACGACGGCAGTTATCAGAGGACGAGCGTGGTGGATACGGCGAGAGTGGCGGCTGGGGAATACGGCGGTGTAAGGAAGTGGGTGGATAGGAGGCTGAGGGATTCTTTTCCGTTGAGTGTGGCGGAGAGGATGATTCGGGTCGGATTGGACTGTGTCGGGAATGACCCGAATGAGCGACCCGACATGGGTCGGGTCTCGATTGAGGTGTCAAAGTTGTACCTGGAATCGAAGGACTGGGATCAGAAAATGGGAACCGATATTGACTTGACGGTCTCGTTGGCCCCACGGTGA 1296 0.5633 MCKSRKSTAATQPGSRRSTNSDRNMTNSPRPHRTQTLTSSSSNYDTSTSEVPVTESRSYVFENNNTNTNTNTNDLLEWSKTSSISSRASLSSLKDTLPESPNIYHFSEISAATANFSAPRLSSSSWRCLIRHRDVVVSRRNFRRQIDLPELSRRLAIICRSHHSSLVKLLGASVSGAVIFLVYEFVPGASLSDCLRNRRNPSYTDLVTWTSRMQIASDIAHGLDYIHNFSGSDSGSGSGSGFVHNHIKSSSIVITEDNLRAKICHFGLSDLCGEAVAGDRGESGERRVRIEGTRGYMAPEFQVSGVATKKTDVYAFGVVVLELLSGEEAVKFEFNDDGSYQRTSVVDTARVAAGEYGGVRKWVDRRLRDSFPLSVAERMIRVGLDCVGNDPNERPDMGRVSIEVSKLYLESKDWDQKMGTDIDLTVSLAPR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02888 431 Pfam Protein tyrosine and serine/threonine kinase 146 400 IPR001245 GO:0004672|GO:0006468
Viun7g02888 431 Gene3D Transferase(Phosphotransferase) domain 1 187 426 - -
Viun7g02888 431 ProSiteProfiles Protein kinase domain profile. 115 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02888 431 Gene3D Phosphorylase Kinase; domain 1 92 185 - -
Viun7g02888 431 SUPERFAMILY Protein kinase-like (PK-like) 140 402 IPR011009 -
Viun7g02888 431 MobiDBLite consensus disorder prediction 1 57 - -
Viun7g02888 431 PANTHER OS09G0572100 PROTEIN 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02888 Viun-Chr7 32099831 32101676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02888 99 419 Receptor kinase-like Gene Family AT1G51940 31.832 4.58e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Viun7g02888 PK_Tyr_Ser-Thr 1.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02888 - - gmx:100820374 662.144