Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02885 ATGATACCATGCCCTCTAGGTTCCTATTGCCCTCTTGCTAAACTCAATAAAACAACTGGCGTATGTGAACCATATCTTTATCAGCTGCCTCCAATGCAGCCAAACCATACCTGTGGTGGAGCAAATGTTTGGGCTGACGTTAGTAGCAGTAGTGACATATTTTGCTCAGCTGGATCGTATTGTCCAACAACCACAAAAATAATTTCTTGCAGTAGTGGACATTACTGCAGGATGGGTTCCACATCCGAGAAAAGATGCTTCAAGTTGAGTTCATGTAATTCAAACACAGCAACCCAAAATATGCGTGCATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAATTGTTCTGACCAAGTTCTCACTACTAGGGAAAGAAGAGTGGCCAAATCTAGAGAAGCAGCAGCTAGAAGTGCAAGGAAGACTGCAAATGCGCGCCAAAGATGGCAATTTGCAAAAGATGCAACTAAGAAGGGTGCAATGGGGCTGCAAGCTCAACTATCTCGCACCTTCAAGAAGGATGCAGCAAATCTGGAAAAAGTTAAAATTCTGGCACAAGCAAATTCTGAAGCAGATGTTGAGTTGTTGTCACATTCACGACCTACAACTTCAAGCATGGTTGCAAGTTCATCTGTGGCAACAAATAAAAAGGGAAAAGAACCCAGTGGTCTGATGCAGATAATACAAGAAATTGAAAATGATCCTGATATTGAAGACAACATTAATACAGAAGTAGAAACTAGAGGTAGAAGTATCTCAGCAAATGTGTCAAAGGGAAAACAACCACATACTCATAGCCAAATTTTTAAGTATGCATATTCTCAGCTAGAAAAAGAGAAAGCTCAGCAACAAGAAAACAAGAAGCTTACCTTCTCGGGGGTAATTAAAATGGCTACAAACACTGAAAGAAGGAAAAGGCCTTTAATTGAAATTTCTTTCAAGGATCTGACTCTAACATTGAAAGCTCAAAACAAGCATATATTGAGATATGTTACTGGGAAAATTAAACCTGGCCGCATAACTGCTGTCATGGGTCCATCAGGGGCAGGCAAGACAACATTTCTTTCAGCTCTAGCTGGAAAGGCATTAGGATGCTCGGTCACTGGTTCAATTCTTATAAATGGAAGGAATGAATCAATCCATTCCTTTAAGAAAATTACTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACCTAACAGTGGAAGAGAATCTCTGGTTCAGTGCACAGTGCAGGCTATCTGTTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTCGAAAGAGTTATTGAATTCTTGGGGCTTCAATCAGTGCGTAATTCGTTGGTTGGAACCGTGGAAAAGCGAGGGATCTCTGGAGGTCAAAGGAAGCGTGTAAATGTTGGATTGGAAATGGTTATGGAACCTTCACTATTGATCTTAGATGAACCCACGTCTGGCTTAGACAGTGCATCTTCTCAGCTGCTTCTAAGAGCACTAAGACGCGAAGCTCTTGAGGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTACAAGATGTTTGATGACCTTATACTTCTGGGAAAAGGTGGTCTTACTGTGTATCACGGATCTGCAAAGAAAGTTGAAGAATACTTTTTAGGTTTGGGGATGAACATTCCAGAGCGGATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCCTGACAACACCTGGTGGAAGCTCAGGACTGAGTTACAAGGACCTGCCAGTTAGATGGATGCTTCATAACGGATATCCAATACCTCTTGATATGAGGCAGAATGCAGTTCAATATGATATGTCACACAGTGTAAATTCAGCTAGTGAAATTGATCCCCATGGATCCAGTCATGCAGACAAAACATTTGCTGGAGAATTATGGCGAGACATGAGAAACAATGTGGAACTCAGTGGGGAGAAGATAAGACACAATTTTTTTAAATCCAAGGATTTATCTGACCGAAAAACTCCTGGCCTTTTCAAGCAATATAAGTATTTTCTTATACGGGTTGGGAAGCAGCGGTTACGAGAAGCTAGGATGCAAGCCATAGATTATCTTATTTTGTTACTTGCTGGAGCCTGCTTAGGATCTCTTACAAAAGGCAGTGAGCAAACATTTGGTGCTGCTGGTTACACCTATACGGTGATTGCAGTATCTCTTTTGTGCAAAATAGCGGCCTTGAGATCATTTTCCTTGGAAAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCTTATTTTCTCTCTAAAGACACCATAGATCATTTCAATACAGTGATCAAGCCTGTGGTGTACCTTTCTATGTTCTATTTCTTCACCAATCCGAGATCAACTTTTGCAGATAATTATATTGTGCTGCTTTGTCTTGTGTACTGTGTTACTGGTATAGCATATGCACTGTCCATATTTTTTGAACCTGGTGCTGCCCAGCTATGGTCAGTACTTCTTCCCGTGGTTTTAACTCTCGTTGCAACACAACCAAACGATAGTAAAATTTTGAAGGATTTAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTAGTTGTTGCAAATGCTGAAAGGTATCAGGGGGTGTGGCTCATAACTCGTTGTGGTTCACTTTTGAAAAGTGGCTACAATCTTCATGATTGGAGTTTGTGCATATCCATCCTCATTTTTATGGGTGTAATTGGTCGAGCTATAGCATTTTTCTGCATGGTAACCTTCCGAAAGAAGTAA 2775 0.409 MIPCPLGSYCPLAKLNKTTGVCEPYLYQLPPMQPNHTCGGANVWADVSSSSDIFCSAGSYCPTTTKIISCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMRAYGIMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAARSARKTANARQRWQFAKDATKKGAMGLQAQLSRTFKKDAANLEKVKILAQANSEADVELLSHSRPTTSSMVASSSVATNKKGKEPSGLMQIIQEIENDPDIEDNINTEVETRGRSISANVSKGKQPHTHSQIFKYAYSQLEKEKAQQQENKKLTFSGVIKMATNTERRKRPLIEISFKDLTLTLKAQNKHILRYVTGKIKPGRITAVMGPSGAGKTTFLSALAGKALGCSVTGSILINGRNESIHSFKKITGFVPQDDVVHGNLTVEENLWFSAQCRLSVDLSKPEKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALYKMFDDLILLGKGGLTVYHGSAKKVEEYFLGLGMNIPERINPPDYFIDILEGLTTPGGSSGLSYKDLPVRWMLHNGYPIPLDMRQNAVQYDMSHSVNSASEIDPHGSSHADKTFAGELWRDMRNNVELSGEKIRHNFFKSKDLSDRKTPGLFKQYKYFLIRVGKQRLREARMQAIDYLILLLAGACLGSLTKGSEQTFGAAGYTYTVIAVSLLCKIAALRSFSLEKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYALSIFFEPGAAQLWSVLLPVVLTLVATQPNDSKILKDLANLCYSKWALQALVVANAERYQGVWLITRCGSLLKSGYNLHDWSLCISILIFMGVIGRAIAFFCMVTFRKK 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02885 924 SMART AAA_5 343 535 IPR003593 GO:0016887
Viun7g02885 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 547 IPR027417 -
Viun7g02885 924 Pfam ABC-2 type transporter 515 924 IPR043926 GO:0140359
Viun7g02885 924 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 317 559 IPR003439 GO:0005524
Viun7g02885 924 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 58 911 - -
Viun7g02885 924 FunFam ABC transporter G family member 24 311 553 - -
Viun7g02885 924 Pfam ABC transporter 336 486 IPR003439 GO:0005524
Viun7g02885 924 CDD ABCG_EPDR 315 541 - -
Viun7g02885 924 ProSitePatterns ABC transporters family signature. 458 472 IPR017871 GO:0005524|GO:0016887
Viun7g02885 924 Gene3D - 315 550 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02885 Viun-Chr7 32082115 32088279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02885 312 518 Calmodulin-binding Proteins AT2G36910 27.358 1.00e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02885 - - gmx:100775464 1628.99