Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02882 ATGTGTAGGTGGAGCACCAACTCAAAGCCTTTGTGGGTGCCCATTGTGCTTTTCAGCTTGTTCCTCTGGATGACGCAGTTGCAGTGCCAACAAATGAATGACTATGACCAAATTGATAGCCCTGCTGTTCTTCCCCTCGTCACTCAGCTTGTGTATAGTCAAATATCCAATTTGACATCAATCATCAGCCAGGAAATTAGCAGAGAGTCCACTTTCTGTGTCAAAGATCCGGATGCTGATTGGAATCAAGCATTTAATTTTTCAACCGATCTGGACTTCTTGGCATCTTGCATTAAGAAGACTAGAGGAGATATTGCAAAACGTTTGTGCACAGCGGCAGAAGTGAAGTTTTTCTTGGATAGTTTATTGGGGAAATCTGTAAGTGCCAATTATTTAAAGCCTAACAAGAACTGCAATTTAACCTCGTGGGTCTCTGGTTGTGAGCCAGGATGGGCCTGTAGTGATCTCTCAAGCCACAAGGTTGATCTTAAAAATTCCAAGGAGATACCTGCAAGAACTTCAAACTGTCAACCATGTTGTGAAGGCTTTTTTTGTCCTCATGGTATCACATGCATGATACCATGCCCTCTAGGTTCCTATTGCCCTCTTGCTAAACTCAATAAAACAACTGGCGTATGTGAACCATATCTTTATCAGCTGCCTCCAATGCAGCCAAACCATACCTGTGGTGGAGCAAATGTTTGGGCTGACGTTAGTAGCAGTAGTGACATATTTTGCTCAGCTGGATCGTATTGTCCAACAACCACAAAAATAATTTCTTGCAGTAGTGGACATTACTGCAGGATGGGTTCCACATCCGAGAAAAGATGCTTCAAGTTGAGTTCATGTAATTCAAACACAGCAACCCAAAATATGCGTGCATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAATTGTTCTGACCAAGTTCTCACTACTAGGGAAAGAAGAGTGGCCAAATCTAGAGAAGCAGCAGCTAGAAGTGCAAGGAAGACTGCAAATGCGCGCCAAAGATGGCAATTTGCAAAAGATGCAACTAAGAAGGGTGCAATGGGGCTGCAAGCTCAACTATCTCGCACCTTCAAGAAGGATGCAGCAAATCTGGAAAAAGTTAAAATTCTGGCACAAGCAAATTCTGAAGCAGATGTTGAGTTGTTGTCACATTCACGACCTACAACTTCAAGCATGGTTGCAAGTTCATCTGTGGCAACAAATAAAAAGGGAAAAGAACCCAGTGGTCTGATGCAGATAATACAAGAAATTGAAAATGATCCTGATATTGAAGACAACATTAATACAGAAGTAGAAACTAGAGGTAGAAGTATCTCAGCAAATGTGTCAAAGGGAAAACAACCACATACTCATAGCCAAATTTTTAAGTATGCATATTCTCAGCTAGAAAAAGAGAAAGCTCAGCAACAAGAAAACAAGAAGCTTACCTTCTCGGGGGTAATTAAAATGGCTACAAACACTGAAAGAAGGAAAAGGCCTTTAATTGAAATTTCTTTCAAGGATCTGACTCTAACATTGAAAGCTCAAAACAAGCATATATTGAGATATGTTACTGGGAAAATTAAACCTGGCCGCATAACTGCTGTCATGGGTCCATCAGGGGCAGGCAAGACAACATTTCTTTCAGCTCTAGCTGGAAAGGCATTAGGATGCTCGGTCACTGGTTCAATTCTTATAAATGGAAGGAATGAATCAATCCATTCCTTTAAGAAAATTACTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACCTAACAGTGGAAGAGAATCTCTGGTTCAGTGCACAGTGCAGGCTATCTGTTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTCGAAAGAGTTATTGAATTCTTGGGGCTTCAATCAGTGCGTAATTCGTTGGTTGGAACCGTGGAAAAGCGAGGGATCTCTGGAGGTCAAAGGAAGCGTGTAAATGTTGGATTGGAAATGGTTATGGAACCTTCACTATTGATCTTAGATGAACCCACGTCTGGCTTAGACAGTGCATCTTCTCAGCTGCTTCTAAGAGCACTAAGACGCGAAGCTCTTGAGGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTACAAGATGTTTGATGACCTTATACTTCTGGGAAAAGGTGGTCTTACTGTGTATCACGGATCTGCAAAGAAAGTTGAAGAATACTTTTTAGGTTTGGGGATGAACATTCCAGAGCGGATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCCTGACAACACCTGGTGGAAGCTCAGGACTGAGTTACAAGGACCTGCCAGTTAGATGGATGCTTCATAACGGATATCCAATACCTCTTGATATGAGGCAGAATGCAGTTCAATATGATATGTCACACAGTGTAAATTCAGCTAGTGAAATTGATCCCCATGGATCCAGTCATGCAGACAAAACATTTGCTGGAGAATTATGGCGAGACATGAGAAACAATGTGGAACTCAGTGGGGAGAAGATAAGACACAATTTTTTTAAATCCAAGGATTTATCTGACCGAAAAACTCCTGGCCTTTTCAAGCAATATAAGTATTTTCTTATACGGGTTGGGAAGCAGCGGTTACGAGAAGCTAGGATGCAAGCCATAGATTATCTTATTTTGTTACTTGCTGGAGCCTGCTTAGGATCTCTTACAAAAGGCAGTGAGCAAACATTTGGTGCTGCTGGTTACACCTATACGGTGATTGCAGTATCTCTTTTGTGCAAAATAGCGGCCTTGAGATCATTTTCCTTGGAAAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCTTATTTTCTCTCTAAAGACACCATAGATCATTTCAATACAGTGATCAAGCCTGTGGTGTACCTTTCTATGTTCTATTTCTTCACCAATCCGAGATCAACTTTTGCAGATAATTATATTGTGCTGCTTTGTCTTGTGTACTGTGTTACTGGTATAGCATATGCACTGTCCATATTTTTTGAACCTGGTGCTGCCCAGCTATGGTCAGTACTTCTTCCCGTGGTTTTAACTCTCGTTGCAACACAACCAAACGATAGTAAAATTTTGAAGGATTTAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTAGTTGTTGCAAATGCTGAAAGGTATCAGGGGGTGTGGCTCATAACTCGTTGTGGTTCACTTTTGAAAAGTGGCTACAATCTTCATGATTGGAGTTTGTGCATATCCATCCTCATTTTTATGGGTGTAATTGGTCGAGCTATAGCATTTTTCTGCATGGTAACCTTCCGAAAGAAGTAA 3348 0.4122 MCRWSTNSKPLWVPIVLFSLFLWMTQLQCQQMNDYDQIDSPAVLPLVTQLVYSQISNLTSIISQEISRESTFCVKDPDADWNQAFNFSTDLDFLASCIKKTRGDIAKRLCTAAEVKFFLDSLLGKSVSANYLKPNKNCNLTSWVSGCEPGWACSDLSSHKVDLKNSKEIPARTSNCQPCCEGFFCPHGITCMIPCPLGSYCPLAKLNKTTGVCEPYLYQLPPMQPNHTCGGANVWADVSSSSDIFCSAGSYCPTTTKIISCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMRAYGIMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAARSARKTANARQRWQFAKDATKKGAMGLQAQLSRTFKKDAANLEKVKILAQANSEADVELLSHSRPTTSSMVASSSVATNKKGKEPSGLMQIIQEIENDPDIEDNINTEVETRGRSISANVSKGKQPHTHSQIFKYAYSQLEKEKAQQQENKKLTFSGVIKMATNTERRKRPLIEISFKDLTLTLKAQNKHILRYVTGKIKPGRITAVMGPSGAGKTTFLSALAGKALGCSVTGSILINGRNESIHSFKKITGFVPQDDVVHGNLTVEENLWFSAQCRLSVDLSKPEKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALYKMFDDLILLGKGGLTVYHGSAKKVEEYFLGLGMNIPERINPPDYFIDILEGLTTPGGSSGLSYKDLPVRWMLHNGYPIPLDMRQNAVQYDMSHSVNSASEIDPHGSSHADKTFAGELWRDMRNNVELSGEKIRHNFFKSKDLSDRKTPGLFKQYKYFLIRVGKQRLREARMQAIDYLILLLAGACLGSLTKGSEQTFGAAGYTYTVIAVSLLCKIAALRSFSLEKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYALSIFFEPGAAQLWSVLLPVVLTLVATQPNDSKILKDLANLCYSKWALQALVVANAERYQGVWLITRCGSLLKSGYNLHDWSLCISILIFMGVIGRAIAFFCMVTFRKK 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02882 1115 Pfam ABC transporter 527 677 IPR003439 GO:0005524
Viun7g02882 1115 SMART AAA_5 534 726 IPR003593 GO:0016887
Viun7g02882 1115 FunFam ABC transporter G family member 24 502 744 - -
Viun7g02882 1115 Pfam ABC-2 type transporter 706 1115 IPR043926 GO:0140359
Viun7g02882 1115 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 249 1102 - -
Viun7g02882 1115 ProSitePatterns ABC transporters family signature. 649 663 IPR017871 GO:0005524|GO:0016887
Viun7g02882 1115 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 508 750 IPR003439 GO:0005524
Viun7g02882 1115 Gene3D - 506 741 IPR027417 -
Viun7g02882 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 508 738 IPR027417 -
Viun7g02882 1115 CDD ABCG_EPDR 506 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02882 Viun-Chr7 32080885 32088279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02882 503 709 Calmodulin-binding Proteins AT2G36910 27.358 1.43e-12 70.5