Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02835 ATGGGAAAAAAGGCCAATTGTGAGAATCAATATGCTATGAACAGAGGTCCTTGGTCTGCTGAAGAAGACAAAATTCTTATGAACTACGTTCAAGTCCACGGAGAAGGTAAATGGAGAGAGCTTTCCAAAAGAGCAGGATTGAAAAGATGTGGCAAGAGTTGTAGACTTCGATGGCTGAATTATCTAAAACCAGATATTAAGAGAGGAAACATTTCTTCTGATGAAGAAGATCTCATTATCAGATTACACAAACTCTTAGGGAATAGATGGTCTCTAATTGCGGGACGATTACCAGGGAGAACAGACAATGAAATTAAGAACTACTGGAATACTTATTTGAGAAAGAAGGTACAGCAGAAGCACAATATTCAAAACGATGTTGTTGGCCACGACACCAAAAATTCCTTGGGTGATGTTCTTGATCCTTCAAAATCCCCTCACCCGATGATGATTAAACCGAAATCGATGAGGTGTACCAAGGTTATGATGCCGGGCAATGATTCGGTGAACGCGATGAATTTCATCAGAACGACCTGGGACCATAACGCTTCTGCATCCATGCCACAAGATGAACATAACCACTGTTTTACCGGTGTTCTTCAAGACTTTGACATCAGTGATTTGTTAATGTCGTACGAGGATGATTGTCGTTTCAATGGCTATGCTTGTGTTGAAATACCCCAACATATTTTTGAAGATCAGACATGGAGGCTTGATGATTCCATGGTTGACGAAGCCTGGTACGAGAATTGGAAGCACGACACCTACTTTTCGCAAGAACAAGATATGGACATGGATATGGGCTTTTCTTCGTTTTAA 819 0.4078 MGKKANCENQYAMNRGPWSAEEDKILMNYVQVHGEGKWRELSKRAGLKRCGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKVQQKHNIQNDVVGHDTKNSLGDVLDPSKSPHPMMIKPKSMRCTKVMMPGNDSVNAMNFIRTTWDHNASASMPQDEHNHCFTGVLQDFDISDLLMSYEDDCRFNGYACVEIPQHIFEDQTWRLDDSMVDEAWYENWKHDTYFSQEQDMDMDMGFSSF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02835 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Viun7g02835 272 FunFam MYB-related transcription factor 14 67 - -
Viun7g02835 272 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Viun7g02835 272 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Viun7g02835 272 Gene3D - 71 135 - -
Viun7g02835 272 SMART sant 14 64 IPR001005 -
Viun7g02835 272 SMART sant 67 115 IPR001005 -
Viun7g02835 272 CDD SANT 72 113 IPR001005 -
Viun7g02835 272 Gene3D - 15 67 - -
Viun7g02835 272 FunFam Transcription factor TT2 71 138 - -
Viun7g02835 272 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Viun7g02835 272 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 160 - -
Viun7g02835 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 62 IPR017930 -
Viun7g02835 272 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Viun7g02835 272 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Viun7g02835 272 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02835 Viun-Chr7 31731564 31732715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02835 3 120 MYB Transcription Factor Family AT3G13540 68.644 5.62e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun7g02835 Myb_DNA-binding 8.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02835 K09422 - gmx:100794570 452.21