Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02834 ATGAAAAGAAAGGGAGCTTATGAGAACCAAGAAGCTGTGAACAGAGGTCCTTGGTCTGCTGAGGAAGACCAAATTCTTATCAACTACGTTCATCTCCATGGAGAAGGAAAATGGGGGCAGATTTCCAGAAGAACTGGTTTAAAACGAGGGGGGAAGAGTTGCAGACTTCGATGGTTGAATTATCTGAAGCCAGATATCAAGAGAGGAAACATTTCTTCGGATGAAGAAGATCTCATTATCAGACTACATAGCCTATTAGGGAACAGATGGTCTCTTATTGCGGGAAGATTGCCTGGGCGAACAGACAATGAAATCAAGAACTATTGGAATACTTATTTGAGAAAGAAAGTAGAGGAGAAACACAATGATAACAACATCAACATTCCTGTGGAATTGAGAATGGAATCTCCAAACTCCTTTGGTATGGCGATTCATCCTGCGAAATCTTCTGAACCAGTAATGTGTACAGAGATTATGATGGCAACTGAAGCAGTGAATGATTCAGTGAACCCAAAGAGTTTGATTTCAACAAATTATATTGAAAACCCATTTGCATCTGTCCCAGGGGATCATCATGCAGAAGGTTTGGGGAAACAGTTTGATTTAACTGAACTGTTAATGCCCCAGGAGAATTGTGATTTGAGTGGATATGGTTGTGTTGGAATATCCCCACATTTTGGAGAACACTCCTGCAGGGTTAATGATGCCATATGTGAAACATGGTACGATGATTGGAAGAATGAAGACTATTTTCCGCTGGAATATGATATGGATTTTCCTTTATTTTAA 789 0.3992 MKRKGAYENQEAVNRGPWSAEEDQILINYVHLHGEGKWGQISRRTGLKRGGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKVEEKHNDNNINIPVELRMESPNSFGMAIHPAKSSEPVMCTEIMMATEAVNDSVNPKSLISTNYIENPFASVPGDHHAEGLGKQFDLTELLMPQENCDLSGYGCVGISPHFGEHSCRVNDAICETWYDDWKNEDYFPLEYDMDFPLF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02834 262 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Viun7g02834 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Viun7g02834 262 FunFam Myb transcription factor 15 67 - -
Viun7g02834 262 Gene3D - 7 68 - -
Viun7g02834 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Viun7g02834 262 SMART sant 67 115 IPR001005 -
Viun7g02834 262 SMART sant 14 64 IPR001005 -
Viun7g02834 262 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Viun7g02834 262 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Viun7g02834 262 FunFam Transcription factor TT2 71 139 - -
Viun7g02834 262 CDD SANT 72 113 IPR001005 -
Viun7g02834 262 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Viun7g02834 262 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 135 - -
Viun7g02834 262 Gene3D - 71 137 - -
Viun7g02834 262 CDD SANT 17 62 IPR001005 -
Viun7g02834 262 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02834 Viun-Chr7 31716955 31718345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02834 8 158 MYB Transcription Factor Family AT5G52600 58.940 2.02e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun7g02834 Myb_DNA-binding 6.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02834 K09422 - gmx:547459 354.369