Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02833 ATGACTGAAGAAAGTGCTGGAAACACAGTTGCAACCTCCGTCACCCCATTAAACTGGTGGTATCTCCAGCCAAATTCTATTTCTTCCTGGAACGATACTAATACCACATGGAACAACCAACCTAACCCTAATTCTTCCTCTTCTTGTGAGGAAGATATATCTGTTTCTACATCTTTCACTAATGCTTCCAACCATTCAACCCTCACTGTTGAGTCCTCTCGCAGACTCATTGACCCTCCTGCCCCTTCCTCCAACAACGACTTCATGGGAGAACATGCTTCGGATAATCAACTTTGGACCCATGTTCTATCAGGTGTTGGATCTAACGGCCAAGAAATTGGAGAGAACTTTCTGGGTGCACTGTCATCAAAAAGCATGACAAGCACTATGTTTCAACCAGTGTGTGACTACTTGAAGAAACTTGATCATAGCAGTTGGGAATATAGTGGTTCAACTTCATTAAACAGCTTGGAGAAGCATTTAAATGGGTTCAGTGAGGCGATGATGGAGAATAATGAAAGGTTGACCAAGTTATCTAATCTTGTAAGCACTTGCTCTATTGCCCCGCCAGACCCGGAAGTAAATAGCCACTTTGATCCACAAACAAACAACATGTCCTTGAATAATTCTTCCATGGATCATTTCCCACAATCCGATCACTTCAAGCAACCTTTTGGAGAATCTCTTGGAGGAGTAGCAAATAGAAATCCTGGAGTGTTCCCATCTTATGATCATGACATGAAGATCAAGCAAGAGTTTCATGCAAGTGAAGTGCAAGGATCGTTAAATGCAAATGGGTATCAAAATGGATTTAATGGCTTTTCAGTGGGTGATAGTTGCAAACTCTACCATGGGATGCCCAATCTTCCTCCATGCACAAGAAATTTCTCAGATGTTATATCCTTTAATAGTCGATTTGGAAGGCCAGTTATTGGAATCCATGCTCAGAAGCCTGGCATGAAGTACCTGAACGTATCTGAACCAAAGAAGCAGGGTCTTCAAGCACCATCACCGATAAGAAGTAATATTAATGGAAAAGGGGAGGGTACAACACGTGAAGTAAAGAAGAAAAGATCGGAAGAATCTTCAGATGCAATGTTAAAAAAGCCTAAGCAAGATACATCAACAGCTTCTTCTTCAAAGGTGCAGGCACCCAAAGTCAAGCTAGGGGACAAAATCACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACAGATACTGCATCTGTGCTGTTTGAAGCAATAGGCTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACTTGAAGGCTAACTGTCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATAAGGACGATACAAAGGTAGATCTTCGGAGCAGAGGTCTTTGTTTAGTTCCTACTTCATGTACTCCTCTAGTTTACAGAGAGAGCAGTGGACCAGATTACTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1485 0.4215 MTEESAGNTVATSVTPLNWWYLQPNSISSWNDTNTTWNNQPNPNSSSSCEEDISVSTSFTNASNHSTLTVESSRRLIDPPAPSSNNDFMGEHASDNQLWTHVLSGVGSNGQEIGENFLGALSSKSMTSTMFQPVCDYLKKLDHSSWEYSGSTSLNSLEKHLNGFSEAMMENNERLTKLSNLVSTCSIAPPDPEVNSHFDPQTNNMSLNNSSMDHFPQSDHFKQPFGESLGGVANRNPGVFPSYDHDMKIKQEFHASEVQGSLNANGYQNGFNGFSVGDSCKLYHGMPNLPPCTRNFSDVISFNSRFGRPVIGIHAQKPGMKYLNVSEPKKQGLQAPSPIRSNINGKGEGTTREVKKKRSEESSDAMLKKPKQDTSTASSSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKANCHKDPWGSLDRKDKDDTKVDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02833 494 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 147 472 - -
Viun7g02833 494 CDD bHLH_AtbHLH_like 388 430 IPR045239 -
Viun7g02833 494 MobiDBLite consensus disorder prediction 369 383 - -
Viun7g02833 494 MobiDBLite consensus disorder prediction 349 368 - -
Viun7g02833 494 MobiDBLite consensus disorder prediction 328 384 - -
Viun7g02833 494 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 388 440 IPR036638 GO:0046983
Viun7g02833 494 Gene3D - 385 441 IPR036638 GO:0046983
Viun7g02833 494 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 373 422 IPR011598 GO:0046983
Viun7g02833 494 MobiDBLite consensus disorder prediction 32 53 - -
Viun7g02833 494 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02833 Viun-Chr7 31697068 31700296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02833 25 494 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 34.504 2.34e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02833 - - vum:124830975 842.802