Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02832 ATGACTGAAGAAAGTGCTGGAAACACAGTTGCAACCTCCGTCACCCCATTAAACTGGTGGTATCTCCAGCCAAATTCTATTTCTTCCTGGAACGATACTAATACCACATGGAACAACCAACCTAACCCTAATTCTTCCTCTTCTTGTGAGGAAGATATATCTGTTTCTACATCTTTCACTAATGCTTCCAACCATTCAACCCTCACTGTTGAGTCCTCTCGCAGACTCATTGACCCTCCTGCCCCTTCCTCCAACAACGACTTCATGGGAGAACATGCTTCGGATAATCAACTTTGGACCCATGTTCTATCAGGTGTTGGATCTAACGGCCAAGAAATTGGAGAGAACTTTCTGGGTGCACTGTCATCAAAAAGCATGACAAGCACTATGTTTCAACCAGTGTGTGACTACTTGAAGAAACTTGATCATAGCAGTTGGGAATATAGTGGTTCAACTTCATTAAACAGCTTGGAGAAGCATTTAAATGGGTTCAGTGAGGCGATGATGGAGAATAATGAAAGGTTGACCAAGTTATCTAATCTTGTAAGCACTTGCTCTATTGCCCCGCCAGACCCGGAAGTAAATAGCCACTTTGATCCACAAACAAACAACATGTCCTTGAATAATTCTTCCATGGATCATTTCCCACAATCCGATCACTTCAAGCAACCTTTTGGAGAATCTCTTGGAGGAGTAGCAAATAGAAATCCTGGAGTGTTCCCATCTTATGATCATGACATGAAGATCAAGCAAGAGTTTCATGCAAGTGAAGTGCAAGGATCGTTAAATGCAAATGGGTATCAAAATGGATTTAATGGCTTTTCAGTGGGTGATAGTTGCAAACTCTACCATGGGATGCCCAATCTTCCTCCATGCACAAGAAATTTCTCAGATGTTATATCCTTTAATAGTCGATTTGGAAGGCCAGTTATTGGAATCCATGCTCAGAAGCCTGGCATGAAGTACCTGAACGTATCTGAACCAAAGAAGCAGGGTCTTCAAGCACCATCACCGATAAGAAGTAATATTAATGGAAAAGGGGAGGGTACAACACGTGAAGTAAAGAAGAAAAGATCGGAAGAATCTTCAGATGCAATGTTAAAAAAGCCTAAGCAAGATACATCAACAGCTTCTTCTTCAAAGGCACCCAAAGTCAAGCTAGGGGACAAAATCACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACAGATACTGCATCTGTGCTGTTTGAAGCAATAGGCTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACTTGAAGGCTAACTGTCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATAAGGACGATACAAAGGTAGATCTTCGGAGCAGAGGTCTTTGTTTAGTTCCTACTTCATGTACTCCTCTAGTTTACAGAGAGAGCAGTGGACCAGATTACTGGACACCAGCATACAGAGGATGTTTGTATAGGTGA 1479 0.4206 MTEESAGNTVATSVTPLNWWYLQPNSISSWNDTNTTWNNQPNPNSSSSCEEDISVSTSFTNASNHSTLTVESSRRLIDPPAPSSNNDFMGEHASDNQLWTHVLSGVGSNGQEIGENFLGALSSKSMTSTMFQPVCDYLKKLDHSSWEYSGSTSLNSLEKHLNGFSEAMMENNERLTKLSNLVSTCSIAPPDPEVNSHFDPQTNNMSLNNSSMDHFPQSDHFKQPFGESLGGVANRNPGVFPSYDHDMKIKQEFHASEVQGSLNANGYQNGFNGFSVGDSCKLYHGMPNLPPCTRNFSDVISFNSRFGRPVIGIHAQKPGMKYLNVSEPKKQGLQAPSPIRSNINGKGEGTTREVKKKRSEESSDAMLKKPKQDTSTASSSKAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKANCHKDPWGSLDRKDKDDTKVDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02832 492 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 386 438 IPR036638 GO:0046983
Viun7g02832 492 MobiDBLite consensus disorder prediction 349 368 - -
Viun7g02832 492 MobiDBLite consensus disorder prediction 328 383 - -
Viun7g02832 492 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 144 470 - -
Viun7g02832 492 MobiDBLite consensus disorder prediction 32 53 - -
Viun7g02832 492 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 371 420 IPR011598 GO:0046983
Viun7g02832 492 Gene3D - 381 439 IPR036638 GO:0046983
Viun7g02832 492 MobiDBLite consensus disorder prediction 64 83 - -
Viun7g02832 492 CDD bHLH_AtbHLH_like 379 428 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02832 Viun-Chr7 31697067 31700296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02832 25 492 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 35.124 2.48e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02832 - - vum:124830975 834.328