Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02798 ATGCACTCCTCCGGCGAAGACGACTCCGACAACCCTGCCACCACCGCGGGCGCCGAGTGGACGTTCTCCGCGAGGAACCACGCACCCTCATCGGACCCCTGCTGGAAAGCCATAGAGCGCGGCGGCGGGACCCTGGGACTGGGCGACCTCCGGTTCGTGCAGCGAGTGGGGAGCGGCGACATCGGAAGCGTGTACTTGGTTGAGCTGAAGGGCTCGAACGGGTGCCTGTTCGCGGCAAAGGTGATGGACAAGAAGGAACTCGTTGCCAGGAACAAAGACACGAGGGCGAAGGTTGAGAGAGAGATTCTGCAAGCGGTGGATCACCCGTTTTTGCCAACTCTTTACGCGTCGCTCGATTCCCCTCGCTGGTCTTGCCTCCTCACCGAGTTCTGCCCCGGCGGCGACCTCCACGTCCTCCGCCAGCGGCAGCCCGATAAACGCTTCCACCACGCCGCCGTTAGGTTCTACGCATCTGAGGTTGTGGTTGCGTTGGAGTATCTACACATGATGGGGATAATATACCGTGATTTGAAGCCTGAAAATGTGCTCATAAGATCGGACGGTCACGTAATGCTCACAGACTTTGACCTCTCACTGAAAGGCGACGACACAACATCAACGGCTCAGATCGTGTTCGATCAAGATCCACCAGGCAACGCCTGTTCCAACGACCATTCCAGGAACCAATGCGCGCCCGCCATGTCATCCTGCATGCTGCCCAATTGCATCGTGCCATCTGTCCCATGCTTCCACCCGAAACGCGGTCGTGGCAAGAGGTCCTCGCGGTGTGGGTCGGTGGAGATCGTGGCGGAGCCAATAGAGATTCGATCGACGTCGTTCGTTGGGACCCACGAGTACTTGGCGCCGGAAGTGATTTCCGGTGAGGGTCACGGTAACGCCGTTGATTGGTGGACACTGGGAGTGTTCATTTTTGAACTGTTCTACGGGATGACACCCTTCAAAGGGCTTGAGCACGAGCTAACCCTAGCGAACATAGTGGCACGTGCCCTTGAGTTCCCTAAGGAACCAATGATCCCAGGTGCAGCTAGGGATTTGATCTCACAACTGTTAGTGAAGGACTCAACAATGAGACTGGGTTCAACAATGGGTGCTCTAGCAATCAAGCACCACCCCTTCTTCAATGGAGTTAATTGGGCATTGTTAAGGTGTGCTACCCCTCCATACATCCCTGCATCAGACAAGTGCAAGGAATTGGTTCGACTCTATAATTGCACAACCAATACCATAGACTTCTATTAG 1260 0.5571 MHSSGEDDSDNPATTAGAEWTFSARNHAPSSDPCWKAIERGGGTLGLGDLRFVQRVGSGDIGSVYLVELKGSNGCLFAAKVMDKKELVARNKDTRAKVEREILQAVDHPFLPTLYASLDSPRWSCLLTEFCPGGDLHVLRQRQPDKRFHHAAVRFYASEVVVALEYLHMMGIIYRDLKPENVLIRSDGHVMLTDFDLSLKGDDTTSTAQIVFDQDPPGNACSNDHSRNQCAPAMSSCMLPNCIVPSVPCFHPKRGRGKRSSRCGSVEIVAEPIEIRSTSFVGTHEYLAPEVISGEGHGNAVDWWTLGVFIFELFYGMTPFKGLEHELTLANIVARALEFPKEPMIPGAARDLISQLLVKDSTMRLGSTMGALAIKHHPFFNGVNWALLRCATPPYIPASDKCKELVRLYNCTTNTIDFY 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02798 419 SUPERFAMILY Protein kinase-like (PK-like) 36 398 IPR011009 -
Viun7g02798 419 Gene3D Phosphorylase Kinase; domain 1 49 134 - -
Viun7g02798 419 Gene3D Transferase(Phosphotransferase) domain 1 135 210 - -
Viun7g02798 419 Gene3D Transferase(Phosphotransferase) domain 1 276 398 - -
Viun7g02798 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Viun7g02798 419 ProSiteProfiles Protein kinase domain profile. 50 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02798 419 FunFam serine/threonine-protein kinase D6PKL2 49 134 - -
Viun7g02798 419 CDD STKc_phototropin_like 53 400 - -
Viun7g02798 419 FunFam serine/threonine-protein kinase D6PK-like 275 398 - -
Viun7g02798 419 Pfam Protein kinase domain 52 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02798 419 Pfam Protein kinase domain 277 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02798 419 PANTHER FLIPPASE KINASE 1-RELATED 21 399 - -
Viun7g02798 419 SMART serkin_6 50 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02798 419 FunFam Serine/threonine-protein kinase OXI1 135 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02798 Viun-Chr7 31349194 31351802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02798 52 419 AGC Kinase Gene Family AT3G44610 64.491 6.88e-179 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun7g02798 Pkinase 3.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02798 K08286 - gmx:100786154 762.296