Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02791 ATGATTTCTTCTGGGATTAACCTGGTGATGACTGTGATTGGGTTTGCGGTGAGCACCATGTTCATTGTTTTCGTCTGCACCAGGCTCATATGTGCTCGAATTCACTTGAATGCTGCAAGGAGATCCTTTCCTATTGTCTCCAGATCCAATCTCAGCATGGTGGAGCGGGGTTCCCATGGTCTCGAACGCGTGACTGTAGCCAAATTTCCAACAAAGAAGTTCAGTGACAAGTTTTTTGCTGCAGCAGAAAATTCTCAATGCACAGTGTGCCTCTCAGAATACCAAGGTGAGGATATGCTGCGTATTCTCCCTTTTTGTGGACACTCCTTCCATGTGACCTGCATAGATCTATGGCTGCAGCAGAATTCCACATGTCCTGTTTGTCGAATATCGTTGCGCGAATTTCCAGATAGAAAGTGGTTAATGCAACCCTTGTTCAGCTCTGCTTTGCAACCTGGAATAGAATCCTTTGACACGCAACATTATCAGTGTATGATGGATGATAATGGATTATCATCAAGAACCCCTGACAACCATGGGGTGAATCCTGTAGAAGAAGATCATTTTCCATCTGAGGTTGGTGGAGCAGTTTCATTAGACAACATCATATGTTTAAGTGAGGGTGACTTCGTTAAAGATGAAGGGAAGAAGCATGTAGAGAGTCCATCAAACTTCCAGAATTGA 684 0.4401 MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHLNAARRSFPIVSRSNLSMVERGSHGLERVTVAKFPTKKFSDKFFAAAENSQCTVCLSEYQGEDMLRILPFCGHSFHVTCIDLWLQQNSTCPVCRISLREFPDRKWLMQPLFSSALQPGIESFDTQHYQCMMDDNGLSSRTPDNHGVNPVEEDHFPSEVGGAVSLDNIICLSEGDFVKDEGKKHVESPSNFQN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02791 227 CDD RING-H2_EL5-like 86 129 - -
Viun7g02791 227 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Viun7g02791 227 SUPERFAMILY RING/U-box 81 135 - -
Viun7g02791 227 PANTHER OS11G0150450 PROTEIN 1 185 - -
Viun7g02791 227 SMART ring_2 87 128 IPR001841 -
Viun7g02791 227 Pfam Ring finger domain 86 129 IPR001841 -
Viun7g02791 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 134 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02791 Viun-Chr7 31266218 31269071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02791 45 136 C3H Transcription Factor Family AT4G10150 41.304 3.46e-19 81.3