Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02789 ATGGGTGACCCATATGGGTTGCCGGAGGATCTCCGGCGGTTTATACCACCCAGAACCCATATGAACCCTTCAAACACGCACCTACTTGAGCCACTGTGTCTTCACCATGGTCTCAGTGCGGTTGCTGCTGCTGCTACTACAATTCCACCGAACACCTATGACCCCAACATGGTTGGGGACGTTTTCTTCCCTCGTGCCTTCACTCACTTTGCTCATCATCATGACTATTCCTCTTCTTCTGGTGTCAACCCTACTAATGCTGCCACCGGTGCTGTCTCGGATCATGCATTCTGCAGCATGGAGAGTGCAGAGAAAGGGTGGTTTGGGTTTGATTCCGGGAACAACAGGTGGCCGAGACAGGAGACCCTTTCGCTTCTAGAGATCAGATCTCGTCTTGATTGCAAGTTCAGAGAGAATAATCAGAAAGCACCCTTGTGGAATGAGATTTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGAAGTGGGAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACGAAGGAAGGTAAAGCCAGTAGACAAGATGGGAAGCACTACAGGTTCTTCAGGCAGCTCGAAGCAATATGCGGAGACCAAGCAAACACAAACCATGCCTCAACTTCAGATAAACCCCATCGTGGTGGTGGAAACAGTAACAACACTAACAACATTCAAACACCAACCTTCACAATCAACCAAGACAACAACGGCGATTCTAGTAACAACCCCAAGTGCTCAGAGAGCCTGAGCATCTCAAACTCGTCCGAATTCGAGACATCCTCGTCCGAAAACAACGAGGAGGATCTTTCCGCCATTGCATTCATGATGAGGCAGTCGAGGGAGAAGCAGAAAGCGTTGTCGGATGAAAGACACGGCGATGAGAGGAGGTTGAGAAAAAGCTGGAGAGCGAAAGTGGAGGAGATTGTGGATTCCCACATGAGGAAAATCATAGAGACCCAAGATGCTTGGATGGAGAGAATGCTGAGCGTTGTTGAACAAAGAGAGCAAGAGATGTCATCGAAGGAGGAAGAGAGGAAGAGGAAAGAGTCGATGTGGTTTGACCAACAGGTGCATGAGCTGTGGGCTAAAGAGAAAGCGTGGGTTGAAGCTAGAGATTCTGCATTGATAGAGGTTGTGAGGAAACACGTGGGGATCGAACTTGAAGCATTGCCTCTGGATGAAGCCATGGTTGAAGAAGCAGGAAACAAGAACAAGGGCCAGGGAAAGATTGAATTTCCGTCGGAGGGTGTGGATCAAAGAGGTAGCAGTAGGTGGACAGAGATGGAGATTTCGAATTTGATACAATTAAGGAGTGGTTTTGAGCAACGATTCAGAGAAAATGGGTACTTGGAGAATGGGCTTTGGGATGAAATATCAGGAAAACTGGGTTGTTTGGGGTTTGAAAGGAGTGGAAGTGAGTGCAAGCAAATATGGGATGAGATCAGCATCTCTCTGAGAAGAACAGTGGATGAGTGTGATGGTGGGAAAAGAAGGCCTTGGTATTTGGGACTTAAGGTGACGGATGATGATGATCTTTGA 1560 0.4718 MGDPYGLPEDLRRFIPPRTHMNPSNTHLLEPLCLHHGLSAVAAAATTIPPNTYDPNMVGDVFFPRAFTHFAHHHDYSSSSGVNPTNAATGAVSDHAFCSMESAEKGWFGFDSGNNRWPRQETLSLLEIRSRLDCKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGDQANTNHASTSDKPHRGGGNSNNTNNIQTPTFTINQDNNGDSSNNPKCSESLSISNSSEFETSSSENNEEDLSAIAFMMRQSREKQKALSDERHGDERRLRKSWRAKVEEIVDSHMRKIIETQDAWMERMLSVVEQREQEMSSKEEERKRKESMWFDQQVHELWAKEKAWVEARDSALIEVVRKHVGIELEALPLDEAMVEEAGNKNKGQGKIEFPSEGVDQRGSSRWTEMEISNLIQLRSGFEQRFRENGYLENGLWDEISGKLGCLGFERSGSECKQIWDEISISLRRTVDECDGGKRRPWYLGLKVTDDDDL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02789 519 CDD GT1 430 495 - -
Viun7g02789 519 FunFam trihelix transcription factor PTL-like 117 179 - -
Viun7g02789 519 CDD GT1 115 181 - -
Viun7g02789 519 ProSiteProfiles Myb-like domain profile. 424 489 IPR001005 -
Viun7g02789 519 Pfam Myb/SANT-like DNA-binding domain 430 501 IPR044822 -
Viun7g02789 519 Pfam Myb/SANT-like DNA-binding domain 115 202 IPR044822 -
Viun7g02789 519 ProSiteProfiles Myb-like domain profile. 115 174 IPR001005 -
Viun7g02789 519 MobiDBLite consensus disorder prediction 409 428 - -
Viun7g02789 519 Coils Coil 331 358 - -
Viun7g02789 519 MobiDBLite consensus disorder prediction 207 272 - -
Viun7g02789 519 FunFam Trihelix transcription factor GT-2 432 494 - -
Viun7g02789 519 PANTHER FI21293P1 77 506 - -
Viun7g02789 519 Gene3D - 117 179 - -
Viun7g02789 519 Gene3D - 432 494 - -
Viun7g02789 519 SMART sant 428 491 IPR001005 -
Viun7g02789 519 SMART sant 113 176 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02789 Viun-Chr7 31245379 31248041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02789 116 494 Trihelix Transcription Factor Family AT5G03680 43.142 2.36e-85 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun7g02789 Myb_DNA-bind_4 7.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02789 - - gmx:100787750 806.979