Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02781 ATGGATGTGCCCAAGCACCGTGCCACTCGAACAACCTCTCTCCGGGATGTCTCCGACTTCTCCAAGATGGAAGTAACCGGAAGCTGGGACGCCCTCGAATGGACCAAAATTGAGCCAATTACGCACTTCGTTTCGAATGCGAATTTCGATTTCTTGATCGAGGCGGAGCAAGTTGTCGCCGAAGGACATGGTGTTGTTCTTGTTAATACAGATGATGCTGGCACATTGATGGTAACAAATTTCCGTCTTATTTTTCTGAGTGAGGGAACTAGAAAAGTCATTTCCCTTGGAACGATACCACTGGCAACCATTGAGAAGTTTAACAAGATAGTTGTAAAGGTTCAGTCAAATAATCGTTATGTAGACAAGACACCAGCTCAGAGACTGCTCCAGGTGATTGGAAAAGATATGAGAATTTTGGTCTTCAGTTTCAGACCACGTACAAAACAGAGACGTGTGGTGTTTGATGCGCTACTGAGGTGTACAAAGCCAACAAGATTGTGGGATCTTTATGCTTTTGCTTCAGGACCTTCCAGGTTTAAGAACGCTACTCCACTGGTCCGTTTACTAGATGAATATTGTCGGCTTCTTTGCCTTGGTTCTTATCATGCATCAATGGATATAATTGAAAATGGGTCGTTCACCTGGTCAAATGAACTATGGAGAATAAGTAGCGTGAATTCCAATTATACAATGTGCCAGAGTTATCCATTTGCTTTGGTTGTTCCAAAGATCATTAGTGATGATGAAGTGCTCCAGGCATCCAGCTTCCGTGCAAGAGGTCGGCTACCTGTAGTTTCATGGTGCCATCCACTGACTGGAGCAGTTGTTGCACGATCTTCTCAACCCTTAGTTGGTATTATGATGAACATGAGGAGCAACATGGATGAAAAACTTGTGGCCGCACTCTGTGGCAAGCTAGATAGTGGCTCAAGGAGAAAGTTATATATTGTTGATGCACGGCCAAGAAAAAATGCATTGGCTAATGGAGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGGTAGTCTTCTTGGGGATAGACAACATCCATGCGATGAGAGACAGCTTTGTTCGGCTCCGAGAATACATGGATACCCATGGCAGAGCGTCATCAGATGGAATGTCCTCTTTCTTGAGACAAGGTGGGTCAACGTGGGGTGGTGGCAATCTAAGTAGTATGTCTGCTTCGGTATCAACCCTTGGGGACAGTGGATGGTTACTGCATGTTCAGAATGTGTTGGCCGGAGCAGCTTGGATTGCTGCTCGTGTTGCAATGGAAAACTCTTCTGTTCTTGTGCATTGCAGTGATGGATGGGATAGGACAAGCCAGTTGGTTTCACTAGCTAATTTGTTGCTTGATCCGTATTATCGCACATTCACAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTTGCTTTTGGTCATCCATTTTCTGATCGGGTGGGAATGCCAGGAACTGGCAACATGCCTTTCGAGTTATCTAGGCAGCCTTCAACTGGAAATTTCGCACCGTCACCCGTGCGCCAGTCAACAGGAACATTTTCATCACAACCTCCAGCTTCATCCCACTCACATAACTCCAACAACTATTCTCCTATTTTTTTGCAGTGGGTTGATTGTGTTTCACAATTATTGCGGATGTATCCTTTTGCTTTTCAATTCTCTGCGGCTTTCCTGGTGGACTTCATAGACTGCATGCTTTCTTGTCGTTTTGGAAACTTCTTATGTAACAGTGAGAAGGAGAGGCAGAAATGCAATGTTTTTGAGGCATGTGGATGTCTGTGGGCTTATTTAGCTGATTTAAGGACATCAGAAGGAGGTTCTCATGTGCATTACAATCCCTTCTATGATTCACTCAAGCATAATGGTCCTCTTCTGCCCCCAGCAGCAGCATTGGCCCCTACGTTGTGGCCTCAATTCCACCTTCGTTGGGCATGCCCAGAAGAAGCACAAGCCGGGGAGATTGAAGCACAATGCAGGAAGATAGTTATGAAATGCTCTGAGATGCAGAAGGCTAAAGAAATGGCAGAAAGAAAAGTTAAAGAAGTTACAAATTCCATGGAGTCACTGAATGCTGAATTACGACGTGAGAAGCAGCTAAACAGCTCAGCTATGAACATGGCAAAGAGTGTGAGCAAAGAAAATATGGCTATAAAGCGTGCAATTCAGTCAATGGGGTGCAAGGTTCATGTGTCTGGTAGTGGTGAATGCACTGTTGACATTGAAAGCAACCCAGACATTGTGTGTTGTTCCTCAAGAAAAGAATCAAATAGTAATGTGCGTGATGAGAAAACGGAGGCACCTGTTTCAGTACTAGTCACAACAGAAGATGATGATGGAAACAATGGGATTGTTCGGGTATGTGAAACTCTATGCCCATTTGGCTCTGCAGCTGGAGGCTGTAGGTGGCCGAAGGGTGGTTGTGCTCAACTAGGTAGTCAGTATGTTGGCCTCAAGGCAAACTTTGATGCATTTGACCAGCTGTCAATTGATGATACTTATTTCAAGTCTGAGTAA 2535 0.4465 MDVPKHRATRTTSLRDVSDFSKMEVTGSWDALEWTKIEPITHFVSNANFDFLIEAEQVVAEGHGVVLVNTDDAGTLMVTNFRLIFLSEGTRKVISLGTIPLATIEKFNKIVVKVQSNNRYVDKTPAQRLLQVIGKDMRILVFSFRPRTKQRRVVFDALLRCTKPTRLWDLYAFASGPSRFKNATPLVRLLDEYCRLLCLGSYHASMDIIENGSFTWSNELWRISSVNSNYTMCQSYPFALVVPKIISDDEVLQASSFRARGRLPVVSWCHPLTGAVVARSSQPLVGIMMNMRSNMDEKLVAALCGKLDSGSRRKLYIVDARPRKNALANGAMGGGSESSSNYFQSEVVFLGIDNIHAMRDSFVRLREYMDTHGRASSDGMSSFLRQGGSTWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVAMENSSVLVHCSDGWDRTSQLVSLANLLLDPYYRTFTGFQALVEKDWLAFGHPFSDRVGMPGTGNMPFELSRQPSTGNFAPSPVRQSTGTFSSQPPASSHSHNSNNYSPIFLQWVDCVSQLLRMYPFAFQFSAAFLVDFIDCMLSCRFGNFLCNSEKERQKCNVFEACGCLWAYLADLRTSEGGSHVHYNPFYDSLKHNGPLLPPAAALAPTLWPQFHLRWACPEEAQAGEIEAQCRKIVMKCSEMQKAKEMAERKVKEVTNSMESLNAELRREKQLNSSAMNMAKSVSKENMAIKRAIQSMGCKVHVSGSGECTVDIESNPDIVCCSSRKESNSNVRDEKTEAPVSVLVTTEDDDGNNGIVRVCETLCPFGSAAGGCRWPKGGCAQLGSQYVGLKANFDAFDQLSIDDTYFKSE 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02781 844 SMART gram2001c 45 111 IPR004182 -
Viun7g02781 844 Pfam Myotubularin-like phosphatase domain 171 589 IPR010569 -
Viun7g02781 844 SUPERFAMILY PH domain-like 53 174 - -
Viun7g02781 844 Gene3D - 63 162 IPR011993 -
Viun7g02781 844 MobiDBLite consensus disorder prediction 511 532 - -
Viun7g02781 844 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Viun7g02781 844 Coils Coil 672 713 - -
Viun7g02781 844 PANTHER MYOTUBULARIN-RELATED 43 764 IPR030564 -
Viun7g02781 844 ProSiteProfiles Myotubularin phosphatase domain. 198 647 IPR010569 -
Viun7g02781 844 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 214 651 IPR029021 -
Viun7g02781 844 CDD PTP-MTM-like 261 549 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02781 1 842 Protein tyrosine phosphatase (PTP) family AT3G10550 66.784 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02781 K18081 - gmx:100781842 1514.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02781 7 31156135 31172104 Viun7g02781 7 31156135 31172104 ECH