Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02724 ATGTCAGGAGAAGAAATCGTGTCATCCAACGAAGAAGAATATGATATATCTCAGCCTCCATTTGGGAACAAAAGTGGTTACAATTCAAGGATAGGCATCTACCACTCTCTAGTTAAGCTTGAAACTAGGCATGAAATCCCAACAAAACCTGACCTCAACACTGCACATTTTGTGCTGTCACAGTTCCCACAAGCACACCTTGCTGAGGCAAAAACGGCATTCATTGATGCAAGAACAAATCTGAGAGTTAGCTATAGTGAGCTAAGAAGGTGTACCTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGAGGTTAGAAAAGGTGATGTGGTTTTTCTATTGTCACCAAACTCAACGTTATACTCAGCCATATGTCTAGCAGTGTTATCAATTGGAGCAGTTCTGACCACTGCCAACCCCATCAACACTGCATCAGAAATTGCGAAACAAGTGCGTGATTCAGGTGCTAAACTAGCCATCTCAACACCAGAGGAGCTGCACAAACTGGTCCCAACTGGGGTTCCTACAATTCTCACTTCTCGTTCTTCTGATGGCAGAATGTTATCAGTTGAAGAGTTGATAGAAGGTTGTTATGATTCAACCGAGTTGCCACATGTTCCTGTGGCACAGTCAGACACTGCTGCTATACTTTACTCTTCAGGGACCACAGGAATAAGCAAAGGTGTGGTTTTAACTCATGCAAATCTCATTTCCATAATGAGATTGGTTTTGTGGTCTGCAGATGTCAGTGGATCCCATGATGACATTTTCTTGGCCTTCATTCCAATGTTTCACATCTATGGATTTGTATTCTTTGGATTAGGGTTGTTGTGTGTTGGTATAACAACAGTTTTGATGCAGAAGTTTGACTTCCAAGATATGCTTGATGCAATCCAGAAGCACAAGGTTAGCAACGTGCCAGCAGTGCCACCGGTGATTCTTGCGCTAGTGAAGTATTCAAGTAAAGCTAGGTGTGACTTGTCCACCCTAAGAAGGTTGGGAACAGGTGCTGCACCTTTGAGCAAGGAAGTGGCGCAGGAATTCAGAAAAATGTTTCCATGGATTGAACTAAGGCAAGGTTATGGACTAACAGAAAGTAGTGGTGGAGCAACATTTTTTGTCTCAGATAAAGATGCTAAAGCTCATCCAGATTCATGTGGGAGGTTGATTCCAACGTTTTCTGCAAAAGTTATAGACACTGAAACGGGGAAGCCTTTGCCCCCTAACAAAGAAGGAGAGTTGTGGTTAAAAAGTCCTACTATTATGAAAGGATATCTGGGAAATTTGGAGGCAACAAGTGCAACAATTGATTCAGAAGGTTGGTTGAGAACTGGTGATCTTAGTTACATTGATGATAATGGATTTGTTCACATAGTTGAACGGATAAAAGAGCTAATCAAGCACAATGGGTATCAGGTTGCTCCTGCAGAACTGGAGTCTGTGCTGCTAAGTCACCCTCTTATAGCTGATGCAGCAGTTATACCGTTGGAAGATGAAGAAACTGGACAGATACCAATGGCATATGTGGTGAGAGCAGCTGGTTCTGAACTCTCAGAAGACCAGATCATTCAATTTGTTGCAGGGCAGGTGGCTCCGTATAAGAAAGTGAGAAAGGTGAGTTTCATTGACACTATTCCAAAGTCAGCTGCTGGCAAGATATTGCGCAAGGATCTTGTTTCACAAAGCAAATTTCAACATGTCTCCAAGCTGTGA 1713 0.4273 MSGEEIVSSNEEEYDISQPPFGNKSGYNSRIGIYHSLVKLETRHEIPTKPDLNTAHFVLSQFPQAHLAEAKTAFIDARTNLRVSYSELRRCTYSLASALFHGLEVRKGDVVFLLSPNSTLYSAICLAVLSIGAVLTTANPINTASEIAKQVRDSGAKLAISTPEELHKLVPTGVPTILTSRSSDGRMLSVEELIEGCYDSTELPHVPVAQSDTAAILYSSGTTGISKGVVLTHANLISIMRLVLWSADVSGSHDDIFLAFIPMFHIYGFVFFGLGLLCVGITTVLMQKFDFQDMLDAIQKHKVSNVPAVPPVILALVKYSSKARCDLSTLRRLGTGAAPLSKEVAQEFRKMFPWIELRQGYGLTESSGGATFFVSDKDAKAHPDSCGRLIPTFSAKVIDTETGKPLPPNKEGELWLKSPTIMKGYLGNLEATSATIDSEGWLRTGDLSYIDDNGFVHIVERIKELIKHNGYQVAPAELESVLLSHPLIADAAVIPLEDEETGQIPMAYVVRAAGSELSEDQIIQFVAGQVAPYKKVRKVSFIDTIPKSAAGKILRKDLVSQSKFQHVSKL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02724 570 CDD 4CL 46 558 - -
Viun7g02724 570 MobiDBLite consensus disorder prediction 1 21 - -
Viun7g02724 570 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Viun7g02724 570 Gene3D - 464 565 IPR045851 -
Viun7g02724 570 FunFam Long-chain-fatty-acid--CoA ligase FadD 43 463 - -
Viun7g02724 570 Pfam AMP-binding enzyme C-terminal domain 477 552 IPR025110 -
Viun7g02724 570 Gene3D - 41 463 IPR042099 -
Viun7g02724 570 SUPERFAMILY Acetyl-CoA synthetase-like 64 561 - -
Viun7g02724 570 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 44 560 - -
Viun7g02724 570 Pfam AMP-binding enzyme 69 467 IPR000873 -
Viun7g02724 570 FunFam 4-coumarate--CoA ligase 2 464 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02724 Viun-Chr7 30757853 30760337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02724 59 559 Monolignol Biosynthesis Gene Families AT1G20500 45.882 1.05e-155 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02724 K10526 - gmx:100783104 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02724 7 30757853 30760337 Viun7g02724 7 30757853 30760337 ECH