Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02721 ATGGCACCTATGGGTCCCGGATTCCGATTCCACCCCACCGACGAAGAGCTGGTGGTGTTCTACCTGAAGCGCAAGATCACCGGAAATCTGTCCCGGTACGACCACATCGCAGTGGTTGATGTCTACAAGCTCGAGCCCTGGGACCTTCCCCCTCTGTCGAAGCTGAAGACCAAGGACTTGGAATGGTACTTCTTCAGCGTGCTGGACCGCAAGTATGGAAATGGCTCCAGGACCAACCGCGCCACCGAGAAGGGCTACTGGAAGACCACTGGGAAGGACCGCCCTGTGGCCCAAGGCGACCGCACCGTGGGCATGAAGAAGACCCTCGTGTACCACATCGGTCGAGCCCCACATGGCCGTCGCACCAATTGGGTCATGCACGAGTACAAGATGCTCGATGAAGAATTGACTCGTGCTGGCACAGTGCTGGTGAGGCTTTTTTTTTTGGGGGAGAAGGATGTGTATGTGGTATGTAGGATTTTCGAGAAGAGTGGTGCTGGACCAAAGAACGGGGCCAAGTATGGTGCTCCCTTGGACGAGAAGGAGTGGGATGTGGATGAGGAGAATGAGCAGAAGGAGGCGGTTCCTTTGCTGCCGACTGGTCATCATGTGGTGGCTCCCTTCACGGAGATTCCTCCAACCGTGGTTGCTCCTCCTTTGCCCGTGACAGATGCAGTGGCTCCTCCTGTGGTAGCAATTGATGGTCACTTTTGGGATGGTATCGGGGTGGCTCCTCCTACGGTAGCAACTGATGCTGATTTTTGGGATGATATTGGGGCCTTTTTGGAAACTAACGACCTTGAGGGGGAACTTGATTTGAGTGATATGAATGGGGGTGTTACTTTTCCATCATTGAACTTTCATCACGGGGAGTGTAGTACCTACGCTGAAAATTCCCAAGAACTCATCAAGGATCAGGAGCCATTGACGGGCATCTTTGGAATTTCTGGGCCTGAAAATGGCCAGCCTCTTGATATGGCTGAGCAACATGACATGGGCACAGGTTCAGTGAAAGATGAAGACAATGGTGAGCAGAGCGAAATTGAGAATCTTCTCAATTTCAATGATGCATTGGATAATATGGATCTGGATCTATATTTTGATGCCACCCAGATTCTTCCAACGGCTGATGATGAATCATTCTTGGAAACCAATGATCTTGCAATTGGGAATGAGGGTGATCTCGTTGAGGCTGATCCTTCTGCGAATGATATTATGCTAGACAAGTATCTTGCACTCCCTGATGATGATGATGATATTTGCAAATATATATCTTTCGATTATTCTCAGGTTCCAGAGATTGAAAACTCTAATTCCAACCAAGGATCACCTTTAACCCAGCAGACTGTGGAGGGAGAAACCGCAAATAAAGCTGTGGTTGGTAAACATGATTCTGAAGCACAAACCAGCAATGAGGCTTTTTCTGTGCAGAATACAGAGGATGCAAAGTTGGCAGCACCAGGAAATACAAACCCATTTGTGAAGCAGGCCTATGGATGGTTAGCAAGCATCCCTGCGGCACCTGCACATGCTTTTGAGTTTCCAGCCAAGGACATTACTCCTGGTATTCATGGTGCAGCTCAGTCTTCCCATCCAGCGCATATAACTACAGGTATGATCAGCATAACAGACATTACTTTTAGAGGCAATGCGATGGATTGGCCCATGGGCAAAATTGGAGGATTTAACACTGCAATGTCTACTGAGTTTTCTCAATCGGATGTTAATTGTGCTGCTTTCATACCTGTTTCTGGCAAGACCGCATTTGTATTGTCACATGGCTGGATTTTTTTGACGGGTTTCTCAGTTCTTATTCTTTCACTTAGTTTCAAGATTGGAAGCGTCATGTATACTGGTAAGTGA 1863 0.482 MAPMGPGFRFHPTDEELVVFYLKRKITGNLSRYDHIAVVDVYKLEPWDLPPLSKLKTKDLEWYFFSVLDRKYGNGSRTNRATEKGYWKTTGKDRPVAQGDRTVGMKKTLVYHIGRAPHGRRTNWVMHEYKMLDEELTRAGTVLVRLFFLGEKDVYVVCRIFEKSGAGPKNGAKYGAPLDEKEWDVDEENEQKEAVPLLPTGHHVVAPFTEIPPTVVAPPLPVTDAVAPPVVAIDGHFWDGIGVAPPTVATDADFWDDIGAFLETNDLEGELDLSDMNGGVTFPSLNFHHGECSTYAENSQELIKDQEPLTGIFGISGPENGQPLDMAEQHDMGTGSVKDEDNGEQSEIENLLNFNDALDNMDLDLYFDATQILPTADDESFLETNDLAIGNEGDLVEADPSANDIMLDKYLALPDDDDDICKYISFDYSQVPEIENSNSNQGSPLTQQTVEGETANKAVVGKHDSEAQTSNEAFSVQNTEDAKLAAPGNTNPFVKQAYGWLASIPAAPAHAFEFPAKDITPGIHGAAQSSHPAHITTGMISITDITFRGNAMDWPMGKIGGFNTAMSTEFSQSDVNCAAFIPVSGKTAFVLSHGWIFLTGFSVLILSLSFKIGSVMYTGK 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02721 620 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 192 - -
Viun7g02721 620 SUPERFAMILY NAC domain 3 163 IPR036093 GO:0003677|GO:0006355
Viun7g02721 620 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Viun7g02721 620 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Viun7g02721 620 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Viun7g02721 620 FunFam Nac domain-containing protein 86 13 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02721 Viun-Chr7 30733818 30737355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02721 4 616 NAC Transcription Factor Family AT5G04410 35.294 3.26e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun7g02721 NAM 6.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02721 - - vun:114191703 1227.62