Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02719 ATGGGTCGCGAAACTGTGTTCCTTCCAGCCCCACCAACCACTACCACCACTACAGTGAATCCAGTGGCAGCACCCGCTGCACCACCTACCTCTCTTGCTCCTGGTTTCAGGTTCCACCCAACTGACGAGGAGCTTGTTATCTATTACCTCAAGCGCAAGGTTTCTGGTAAAAGTTTCCGATTTGATGCTATATCCGAAGTGGACATATACAGGAGCGAGCCCTGGGACCTAGCAGATAAGTCGAGGTTGAAGACTAGGGACCAAGAATGGTATTTTTTTAGTGCATTGGACAAGAAGTATGGAAATGGTGGGAGGATGAACAGGGCTACTAACAAAGGGTATTGGAAAGCCACTGGAAATGATCGGCCAGTGAAGCATGACCAAAGGACTGTGGGACTGAAGAAAACTTTGGTGTTTCACAGTGGCCGGGCTCCTGATGGAAAGAGGACTAATTGGGTCATGCATGAGTACAGGCTTGTTGATGAGGAGTTAGAGAGGGCTGGGACTGGATCCTCTCAGCCTCAGGATGCGTATGTTTTATGTAGAGTGTTTCACAAAAATAACATAGGACCTCCAAATGGGCAACGATATGCACCTTTCGTTGAAGAAGAGTGGGATGATGCATCTGGAATGGTTCCAGGGGCAGACCCTGTGCATAATGGCTCTATCGCCCACCAGCCACATGTTGAAGGCAACAATGGTGTTTTATGCGCTGAAGGGAGAAATGGTGTTCTACAGGACACTCAATCTATCAACAAAACTCCATTTGATGTGAACAAGCTTCCTATAGAAACTCAAAATCTTCTAGCTGTGTGCAAGAGGGAAAGCATGGCTGAGTATCCATCTCCTGAAAAGGATGATAATAATTGTAAGCAAGTGGATGAGTACCCTTCACCCCAAACAGACAATCCAAAGCCTTTCTCTCTAATATACAAACGAAGGCGGCATAACTTGAACTCCAACCACTCTAATGTTTCTGGAGATTCAATCCGAACCGGTCAGGATCCGTGCTCCTCTACAATAACTACTGCAGCAACAACACTCCCAACCACCACTGCTGGTGCTGCCACCACCAACTCTGCACCGAAAAAACATTTTCTGTCTGCACTGGTGGAGTTTTCCCTGCAAGAGTCCCTTGAATCTAAGGAAAGTCTTGCACTGGTTAAGGCACCGGATTTTGACGCTGAAAACCTTGAGTCATCCATGTCTCCGAGCTGTATCAAGTTCATCAAGGACTTGCAGAACGAGATGCATAAGATTGCAGTCGAAAAGGAGACAATGAGGTTTGAGATAATGAGCGCTCAAGCGATGATCAACATCCTCCAGTCTCGTGTTGACATTCTCAGCAAAGAGAATGAGGACTTGAAGAGAATGGCCCAAAAACCTTAG 1389 0.4672 MGRETVFLPAPPTTTTTTVNPVAAPAAPPTSLAPGFRFHPTDEELVIYYLKRKVSGKSFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATNKGYWKATGNDRPVKHDQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDEELERAGTGSSQPQDAYVLCRVFHKNNIGPPNGQRYAPFVEEEWDDASGMVPGADPVHNGSIAHQPHVEGNNGVLCAEGRNGVLQDTQSINKTPFDVNKLPIETQNLLAVCKRESMAEYPSPEKDDNNCKQVDEYPSPQTDNPKPFSLIYKRRRHNLNSNHSNVSGDSIRTGQDPCSSTITTAATTLPTTTAGAATTNSAPKKHFLSALVEFSLQESLESKESLALVKAPDFDAENLESSMSPSCIKFIKDLQNEMHKIAVEKETMRFEIMSAQAMINILQSRVDILSKENEDLKRMAQKP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02719 462 MobiDBLite consensus disorder prediction 1 26 - -
Viun7g02719 462 SUPERFAMILY NAC domain 26 187 IPR036093 GO:0003677|GO:0006355
Viun7g02719 462 MobiDBLite consensus disorder prediction 279 307 - -
Viun7g02719 462 FunFam Nac domain-containing protein 86 41 189 - -
Viun7g02719 462 Gene3D NAC domain 41 189 IPR036093 GO:0003677|GO:0006355
Viun7g02719 462 MobiDBLite consensus disorder prediction 9 24 - -
Viun7g02719 462 Coils Coil 438 458 - -
Viun7g02719 462 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 31 319 - -
Viun7g02719 462 Pfam No apical meristem (NAM) protein 34 159 IPR003441 GO:0003677|GO:0006355
Viun7g02719 462 ProSiteProfiles NAC domain profile. 32 186 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02719 Viun-Chr7 30718969 30728844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02719 1 457 NAC Transcription Factor Family AT3G10480 43.557 1.06e-117 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun7g02719 NAM 2.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02719 - - gmx:100808783 769.229