Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02704 ATGTTTTCTAGGTTGATACATCCCCATGAAGGGGGTGTTGGGCAGGAAGACATGCAGGGTGCTTCCAATCACGCTCACCTCGGAGACCCTTGTCTTGTTCTCACCTCTGACCCCAAACCTCGTCTTCGGTGGACCTCTGACCTTCACGAACGCTTTGTTGATGCTGTCACTCAACTTGGGGGTGCCAGTAAAGCCACTCCTAAAGCGATCATGAGAACCATGAATGTCAAGGGTTTGACACTCTATCATTTAAAAAGTCATCTACAGAAGTACAGGCTTGGAAAGCAATCAGGAAAAGATTCTGATGAGGGATGCAAAGATGGTTCATATCTTCAAGAAAGCCCCGGTACTGACAACTCATCTCCAAAGTTACCAACTTCTGATGCAAACGATTCCAATGTCACGTGTAGGGGTCATGAAGTGAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAGGCAGAAAAGCACTTGCAAATTCGGCAGGATGCAGAGCGGAGGTACATGGGCATGCTTGAGCGAGCATGTAAGATGTTAGCAGATCAATTTATTGGGGATATAATTATGGACACAGATGGTCAAAAATTTCAAGGGCTGGAAAGCAAAACACCCAGAAATTCCCTTGTTGATCACGTTGGGTTTTTCCCTCAAGTGTGTTCTGAGGTAGGTGGAATGCATGTTTCAGAAGTACCACCTATTCTCCACCCTCAAGGAGCTGATTGTTCCACTGAAAGTTGCCTGACATCACTGGAGAGTTTAGGAGGGTTGACGCTCGAAGGATCTCCGGGCGGATCAAAGAAGAGGATGCTGAGCTTGGATTCAATGGTGGCACCATTGATCTGGAGTGAAGCCAACACCAGAACTCAAGGAATCCATTTAGCTCAAGTCAATCCTCCAGGAATAACTAGGTATGGTATGTAG 942 0.4618 MFSRLIHPHEGGVGQEDMQGASNHAHLGDPCLVLTSDPKPRLRWTSDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGSYLQESPGTDNSSPKLPTSDANDSNVTCRGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMGMLERACKMLADQFIGDIIMDTDGQKFQGLESKTPRNSLVDHVGFFPQVCSEVGGMHVSEVPPILHPQGADCSTESCLTSLESLGGLTLEGSPGGSKKRMLSLDSMVAPLIWSEANTRTQGIHLAQVNPPGITRYGM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02704 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Viun7g02704 313 MobiDBLite consensus disorder prediction 94 134 - -
Viun7g02704 313 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Viun7g02704 313 FunFam Myb family transcription factor 38 96 - -
Viun7g02704 313 MobiDBLite consensus disorder prediction 112 134 - -
Viun7g02704 313 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Viun7g02704 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Viun7g02704 313 Gene3D - 38 96 - -
Viun7g02704 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 213 IPR044848 GO:0003700
Viun7g02704 313 MobiDBLite consensus disorder prediction 1 24 - -
Viun7g02704 313 Pfam MYB-CC type transfactor, LHEQLE motif 140 185 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02704 Viun-Chr7 30508066 30511410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02704 8 257 G2-like Transcription Factor Family AT3G24120 45.946 1.60e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun7g02704 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02704 - - vum:124825518 567.385