Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02692 ATGGGGTGTCTCTTGCTGCTTCTGTGTTTTTCTAGTTTTTTATATGCTGTTTCTGCCTTAAACTCTGATGGGTTGGCTTTGTTGTCCCTCTCCCGGGACTGGGTTGTTGGGTCTGGGGACATAAACTCTACATGGAAGCTGTCTGATTCCACTCCATGCTCGTGGGTGGGAGTGCATTGTGATAATGCCAATAATGTGAATTCTCTAAACCTCAGTAGATATTCTATTTTTGGCCAATTAGGACCTGAAATTGGACGTTTGATTCACTTGCAGACCATAGACTTGTCAGATAATGATATGTTTGGAAAAATTCCCCCAGAATTAAACAACTGTAGCATGCTTGAGTACATGGACATTACTAGAAACAACTTTAGTGGAGGAATACCAGAGAGCTTTCGAAACTTGCAAGATTTGACGTATCTGGATCTCTCAATTAATCGGCTGAGTGGTGACATTCCTAAGTTCTTGTGGGAATTTCGTCTCCTGGAAGAAGTGTATCTTAGTGACAACAGTTTAAGTGGTTCCATTCCCTCTAGTATTGGGAATATGACCAACCTTATCACACTGGATCTTTCTTTTAATCAGCTGTCAGGGACTATTCCCATGTCCATTGGAAATTGTAGTAAATTAGAGAATCTGTATTTAAGAGGTAATAAATTGCAGGGAGTTATTCCGGAGAGTCTAAATAATCTCGAAAATCTTCTTGAGTTATTTCTCGATCGTAATAGTCTTGGAGGTACTATTCAACTGGGATCTAGAAATTGTAAAAAGTTGTCTGTTCTGTCTCTTTCTTACATTAACTTCAGTGTGCCTATACCATCAAGCTTGGGGAATTGTAGTGGCCTAAAAGAGTTTTATGCTGTAGAAAGTAACTTTGTTGGCAGTATACCGTCATCCTTAGGACTCCTTACCAACCTTTCTATTCTAGTGATTCCACAGAACCAATTGTCTGGGAAAATACCTCCACAGATTGGTAATTGCAAATCCCTGGAAGAGTTGTATTTGCATACCAATGAACTCGAAGGAGAAATTCCTAGTGAATTGGGAAACTTGAGTATATTACGCGAACTTTTGTTGTTTGAAAACCATTTGACAGGAAAAATTCCACTTGGCATTTGGAAAATTCAAACACTTGAGCAGGTACACGTATACATTAATAACCTTTCAGGTGAGCTACCTCTTGAGATGGCACAGCTTAAACATCTTAAGAATATCACCTTCTTTGAAAATCAGTTCTCCGGAGTCATTCCTCAAAGCTTAGGGATCAATAGCAGTTTGGTTGTGTTTGACGTCACGGATAATAATTTCACCGGTCCCATCCCACCAAATGTTTGCTTTGGAAAGCAATTGGTCAGGTTGAATATGGCTGGCAATCAACTTTATGGCAGCATACCACCTGATCTTGGAAGATGCACAACTCTTGAAAGGCTGAGACTTGAACAAAACAATTTCTCCGGGCCACTTCCTGATTTTGAAACTAATCCAAATCTCCTTCATATGAACATCAACAACAACAATATCAGGGGTGAAATTCCATCAACTTTTGGAAACTGCACAAATCTCTCTCTTTTAGATTTATCCGTTAACAGCTTGACAGGTCTTGTACCCTCGGAGCTGGGAAACCTTGTGAATCTCCGGACTTTGGTTCTTTCTCACAATACTTTGAAAGGTCCTTTGCCACATCAACTGTCAAACTGTAACAAAATGATCGAGTTTGATGTTGGATTCAATTTCTTGAATGGTTCGTTTCCATCAAATTTTGGGAACTGGACTGGATTAACAACTTTAATTCTCTCAGAGAATAATTTTGATGGTGGTATTCCAGCATTCTTATCAGAATTTAAAAGGCTCAATGATTTACAACTTGGAGGAAACATGTTTGGAGGAACCATTCCTAAATCAATTGGAGAACTGGTGGATTTGATGTATAATCTAAATCTAAGTGCTAATGGGCTGATAGGTGAGCTTCCTAGGGACATCCAGAACCTGAAGAATCTTGTACAACTGGATCTATCTTGGAACAATTTGACAGGAAGTATACAATTTCTCAATGACCTCAGTTCATTATCTGAGTTCAACATTTCATACAATTCTTTTGAAGGTCCTGTGCCACTACGGCTAACAAGTTTAACAAATTCTTCTTTATCTTTTTTGGGCAATCCTGGCCTATGTACCTCAAATTTCACTGAAAACAGCTATTTAAGGCCCTGTGACATAACTTCAAAAAAGTCAGAAAAGCTCAGCAAAGTTGCAATCACGATGATAGCACTTGGATCCTTAATATCACTCGTTCTGCTGCTGGGGTTAATTTATATATTTTTTATCAGAAAAATTAAGCAGGAACCCACAATCAACGAAGATGATAATTCTCCACCCCTTCTCAATATGGTTATGAAAGCTACAGAAAATCTAAATGATCAGTATATTATTGGAAGAGGAGCTCAAGGAGTTGTCTATAAAGCAGCACTTGGTCCAGACAATATTTTGGCTATAAAGAAGTTTGTATTTGCTAGTGATGAAACGAAGAGCTCAAGCATGACCAGAGAAATTCAAACCCTTGGAAATATTAGGCATCGAAATTTGGCAAAAATGGAAGGCTGCTGGTTGAGAGAAAACTATGGTCTCATTGCATACAAATACATGCCAAATGGAAGTCTGTACGATGCTTTGCATGAGAAGAAGGGATCTCATTCCTTAGATTGGAATATCCGGAATAAGATAGCTGTTGGAATTGCTCATGGATTGGCTTATCTCCATCATGACTGTGATCCTGTCATTGTGCACAGAGATATCAAAACAACCAATATACTTCTAGATTCTGAGATGGAGCCCCATATTGCAGATTTTGGTATTGCCAAGCTTTTGGATCAGCCTTCTACCTCCACACAGTCAATATATGTCACTGGTACACTTGGTTATATACCACCAGAGAATGCTTATACAACAACAAAGGGTAAAGAGGCCGATGTATACAGTTATGGTGTAGTATTGCTGGAGCTGATATCCAGAAAGAAGGCATTGGATCCATCATTTGTAGAAGGAACAGATATAGTTAATTGGGCTAGATCTGCCTGGGAGGAAGCAGGAGTTGTTGATGAAATTGTTGATTCAGAGTTGGCTGGTGAAATTTCAAATTCTGAAGTTACGAAACAAGTTACAAAGGTTCTTTTGGTGGCTTTGAGATGTACATTAAAGGATCCACGCAGCAGACCAACGATGAGGGATGTTATCAAGAATTTGTATGCAGATGGTAAAAGCTCCACATAA 3267 0.3897 MGCLLLLLCFSSFLYAVSALNSDGLALLSLSRDWVVGSGDINSTWKLSDSTPCSWVGVHCDNANNVNSLNLSRYSIFGQLGPEIGRLIHLQTIDLSDNDMFGKIPPELNNCSMLEYMDITRNNFSGGIPESFRNLQDLTYLDLSINRLSGDIPKFLWEFRLLEEVYLSDNSLSGSIPSSIGNMTNLITLDLSFNQLSGTIPMSIGNCSKLENLYLRGNKLQGVIPESLNNLENLLELFLDRNSLGGTIQLGSRNCKKLSVLSLSYINFSVPIPSSLGNCSGLKEFYAVESNFVGSIPSSLGLLTNLSILVIPQNQLSGKIPPQIGNCKSLEELYLHTNELEGEIPSELGNLSILRELLLFENHLTGKIPLGIWKIQTLEQVHVYINNLSGELPLEMAQLKHLKNITFFENQFSGVIPQSLGINSSLVVFDVTDNNFTGPIPPNVCFGKQLVRLNMAGNQLYGSIPPDLGRCTTLERLRLEQNNFSGPLPDFETNPNLLHMNINNNNIRGEIPSTFGNCTNLSLLDLSVNSLTGLVPSELGNLVNLRTLVLSHNTLKGPLPHQLSNCNKMIEFDVGFNFLNGSFPSNFGNWTGLTTLILSENNFDGGIPAFLSEFKRLNDLQLGGNMFGGTIPKSIGELVDLMYNLNLSANGLIGELPRDIQNLKNLVQLDLSWNNLTGSIQFLNDLSSLSEFNISYNSFEGPVPLRLTSLTNSSLSFLGNPGLCTSNFTENSYLRPCDITSKKSEKLSKVAITMIALGSLISLVLLLGLIYIFFIRKIKQEPTINEDDNSPPLLNMVMKATENLNDQYIIGRGAQGVVYKAALGPDNILAIKKFVFASDETKSSSMTREIQTLGNIRHRNLAKMEGCWLRENYGLIAYKYMPNGSLYDALHEKKGSHSLDWNIRNKIAVGIAHGLAYLHHDCDPVIVHRDIKTTNILLDSEMEPHIADFGIAKLLDQPSTSTQSIYVTGTLGYIPPENAYTTTKGKEADVYSYGVVLLELISRKKALDPSFVEGTDIVNWARSAWEEAGVVDEIVDSELAGEISNSEVTKQVTKVLLVALRCTLKDPRSRPTMRDVIKNLYADGKSST 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02692 1088 Gene3D Ribonuclease Inhibitor 454 745 IPR032675 -
Viun7g02692 1088 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 179 - -
Viun7g02692 1088 Gene3D Transferase(Phosphotransferase) domain 1 881 1087 - -
Viun7g02692 1088 Gene3D Ribonuclease Inhibitor 132 206 IPR032675 -
Viun7g02692 1088 Gene3D Ribonuclease Inhibitor 207 291 IPR032675 -
Viun7g02692 1088 SUPERFAMILY RNI-like 69 447 - -
Viun7g02692 1088 PANTHER UNNAMED PRODUCT 285 641 - -
Viun7g02692 1088 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 180 308 - -
Viun7g02692 1088 ProSiteProfiles Protein kinase domain profile. 804 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02692 1088 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 311 392 - -
Viun7g02692 1088 SMART LRR_sd22_2 542 568 - -
Viun7g02692 1088 SMART LRR_sd22_2 303 335 - -
Viun7g02692 1088 SMART LRR_sd22_2 207 233 - -
Viun7g02692 1088 SMART LRR_sd22_2 183 198 - -
Viun7g02692 1088 SMART LRR_sd22_2 135 154 - -
Viun7g02692 1088 SMART LRR_sd22_2 663 688 - -
Viun7g02692 1088 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Viun7g02692 1088 ProSiteProfiles Leucine-rich repeat profile. 665 687 IPR001611 GO:0005515
Viun7g02692 1088 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 407 736 - -
Viun7g02692 1088 Gene3D Phosphorylase Kinase; domain 1 775 880 - -
Viun7g02692 1088 SUPERFAMILY Protein kinase-like (PK-like) 790 1081 IPR011009 -
Viun7g02692 1088 Pfam Protein kinase domain 808 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02692 1088 SUPERFAMILY RNI-like 425 720 - -
Viun7g02692 1088 Gene3D Ribonuclease Inhibitor 24 131 IPR032675 -
Viun7g02692 1088 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 772 880 - -
Viun7g02692 1088 SMART LRR_typ_2 542 566 IPR003591 -
Viun7g02692 1088 SMART LRR_typ_2 183 207 IPR003591 -
Viun7g02692 1088 SMART LRR_typ_2 448 471 IPR003591 -
Viun7g02692 1088 SMART LRR_typ_2 87 111 IPR003591 -
Viun7g02692 1088 SMART LRR_typ_2 231 255 IPR003591 -
Viun7g02692 1088 SMART LRR_typ_2 135 159 IPR003591 -
Viun7g02692 1088 SMART LRR_typ_2 663 686 IPR003591 -
Viun7g02692 1088 SMART LRR_typ_2 303 327 IPR003591 -
Viun7g02692 1088 SMART LRR_typ_2 518 541 IPR003591 -
Viun7g02692 1088 SMART LRR_typ_2 328 351 IPR003591 -
Viun7g02692 1088 Pfam Leucine rich repeat 161 220 IPR001611 GO:0005515
Viun7g02692 1088 Pfam Leucine rich repeat 89 148 IPR001611 GO:0005515
Viun7g02692 1088 Pfam Leucine rich repeat 495 555 IPR001611 GO:0005515
Viun7g02692 1088 Gene3D Ribonuclease Inhibitor 302 453 IPR032675 -
Viun7g02692 1088 SMART serkin_6 804 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02692 1088 FunFam Serine/threonine-protein kinase-like protein CCR4 881 1088 - -
Viun7g02692 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02692 Viun-Chr7 30438933 30442589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02692 11 1078 Receptor kinase-like Gene Family AT1G73080 49.816 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun7g02692 Pkinase 4.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02692 - - gmx:100817655 1652.88