Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun7g02690 | ATGAACAACAGCACATCCACTAAAGACTATGGTTTTAACTCAGATGGGTTCGCATATGGAGTAGCTTTTGTAATTGGGTCGGTGGTCTTACTTCTGACGGTGACTTTTGCATGTGTGCGCCTTCGCATGGCTCGAGGTCCCAACATGCTAAATATTTTGGGTGGAATTCCAGCATCTCATCCCGCAACAGATGAAGACTCAGCTGAACAAGGGGTTGGCCTTAGACTCGATGACATTGACACAAGCTTTGAAAGGTATCCGAAACTCGTATACTCGGAAGTAGAGAAGAGTTCAAGTTCAAGCAACATCCCTTCTTGTAGCTGCTCCATCTGCTTAGGTGACTACAAAGAGGGTGACATGTTGAGGCTACTTCCTCGCTGTGACCATATTTTTCACCTTGCTTGCGTTGATCCATGGCTTAGGTTGCATTCAACATGTCCCATATGTAGAAAATCATCTCTTCAACCTTCACTTCTTCCTCCCTCCACTTGA | 492 | 0.4533 | MNNSTSTKDYGFNSDGFAYGVAFVIGSVVLLLTVTFACVRLRMARGPNMLNILGGIPASHPATDEDSAEQGVGLRLDDIDTSFERYPKLVYSEVEKSSSSSNIPSCSCSICLGDYKEGDMLRLLPRCDHIFHLACVDPWLRLHSTCPICRKSSLQPSLLPPST | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun7g02690 | 163 | ProSiteProfiles | Zinc finger RING-type profile. | 108 | 150 | IPR001841 | - | |
Viun7g02690 | 163 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 156 | IPR045899 | - | |
Viun7g02690 | 163 | CDD | RING-H2_EL5-like | 110 | 150 | - | - | |
Viun7g02690 | 163 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 75 | 154 | IPR013083 | - | |
Viun7g02690 | 163 | SMART | ring_2 | 108 | 149 | IPR001841 | - | |
Viun7g02690 | 163 | Pfam | Ring finger domain | 107 | 150 | IPR001841 | - | |
Viun7g02690 | 163 | SUPERFAMILY | RING/U-box | 107 | 156 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun7g02690 | Viun-Chr7 | 30416576 | 30417522 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun7g02690 | 16 | 160 | C3H Transcription Factor Family | AT5G06490 | 38.889 | 1.22e-27 | 100 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun7g02690 | - | - | var:108343169 | 267.314 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun7g02690 | 7 | 30416576 | 30417522 | Viun7g02690 | 7 | 30416576 | 30417522 | ECH |