Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02690 ATGAACAACAGCACATCCACTAAAGACTATGGTTTTAACTCAGATGGGTTCGCATATGGAGTAGCTTTTGTAATTGGGTCGGTGGTCTTACTTCTGACGGTGACTTTTGCATGTGTGCGCCTTCGCATGGCTCGAGGTCCCAACATGCTAAATATTTTGGGTGGAATTCCAGCATCTCATCCCGCAACAGATGAAGACTCAGCTGAACAAGGGGTTGGCCTTAGACTCGATGACATTGACACAAGCTTTGAAAGGTATCCGAAACTCGTATACTCGGAAGTAGAGAAGAGTTCAAGTTCAAGCAACATCCCTTCTTGTAGCTGCTCCATCTGCTTAGGTGACTACAAAGAGGGTGACATGTTGAGGCTACTTCCTCGCTGTGACCATATTTTTCACCTTGCTTGCGTTGATCCATGGCTTAGGTTGCATTCAACATGTCCCATATGTAGAAAATCATCTCTTCAACCTTCACTTCTTCCTCCCTCCACTTGA 492 0.4533 MNNSTSTKDYGFNSDGFAYGVAFVIGSVVLLLTVTFACVRLRMARGPNMLNILGGIPASHPATDEDSAEQGVGLRLDDIDTSFERYPKLVYSEVEKSSSSSNIPSCSCSICLGDYKEGDMLRLLPRCDHIFHLACVDPWLRLHSTCPICRKSSLQPSLLPPST 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02690 163 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Viun7g02690 163 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 156 IPR045899 -
Viun7g02690 163 CDD RING-H2_EL5-like 110 150 - -
Viun7g02690 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 154 IPR013083 -
Viun7g02690 163 SMART ring_2 108 149 IPR001841 -
Viun7g02690 163 Pfam Ring finger domain 107 150 IPR001841 -
Viun7g02690 163 SUPERFAMILY RING/U-box 107 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02690 Viun-Chr7 30416576 30417522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02690 16 160 C3H Transcription Factor Family AT5G06490 38.889 1.22e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02690 - - var:108343169 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02690 7 30416576 30417522 Viun7g02690 7 30416576 30417522 ECH