Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02689 ATGAATAGTTCAGAGGAGTCTGTGTTATTGCTAGTGAGCTTTATTATTCTGACTCTTATCGTCACACTTGCGGCTTATTTGTGTTCTACGGATATTCCACGCACTGCTCCTTCTGTTCCTGCTGCTGTGACACACTCCAACCACACCACAATCACCGTGGAGGCACCTGAGCCATGCATAGATCAGAGTGTCTGCAACTTTCCGAGTCTCCAATTTTCCAAAGCCAAATTGTGTGGTAGCACTAGTAGTAGCTCTTCAAGCTGTTCCATATGCTTGATGGATTACAAAGACCGTGATTCACTCAGAGTGCTGCCTGCCTGTGGTCACTTCTTCCATGTCAAGTGTGTTGATCCTTGGTTGAGAATCAACATGACATGTCCAGTTTGTAGGACCACAATAGCCCTATCAGATAAATGTCAATGCCTGTCCATAGTGTTGGTTATCTCAGGCAAGCTTGCAATGGAAAATAATCATGAGATAGAGTCATGTTTGTTAAGGTACATATCTGAGACAAAGAAGCTAGCTATGCTTCCAATGAAGGAATCCAAACTCAAGATATTAAAAAGCAAGCAAGAAAATTAA 582 0.4244 MNSSEESVLLLVSFIILTLIVTLAAYLCSTDIPRTAPSVPAAVTHSNHTTITVEAPEPCIDQSVCNFPSLQFSKAKLCGSTSSSSSSCSICLMDYKDRDSLRVLPACGHFFHVKCVDPWLRINMTCPVCRTTIALSDKCQCLSIVLVISGKLAMENNHEIESCLLRYISETKKLAMLPMKESKLKILKSKQEN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02689 193 Pfam Ring finger domain 87 130 IPR001841 -
Viun7g02689 193 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Viun7g02689 193 SMART ring_2 88 129 IPR001841 -
Viun7g02689 193 SUPERFAMILY RING/U-box 81 136 - -
Viun7g02689 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 135 IPR013083 -
Viun7g02689 193 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 134 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02689 Viun-Chr7 30414740 30415692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02689 61 155 C3H Transcription Factor Family AT5G06490 43.878 1.09e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02689 - - vun:114191385 378.252