Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02669 ATGGCCACAGAAGAAGAAATTTCAACTCTGAAACTGATGCGCCAATATCTCTTGGGAGATATTTCAGACCCGTTTCTCACCAACCTCATCCCTGTAAAAGTTGAAGACTCCTCATCAGAACTTGATTTGGATTCAAAGTTTTCAGAACAGAGCAGCTTCTGCAGGTTTCTAGAATGCTTTGATTTTGAAGCAGACAAAGAACTGTCAAATCTCACTTCTAATCATAATATCCAAAACCCCTTTGCTACAAGTCCACTCCAGAATTCTGATTTGGAAGATCCAATTGTGCCAGTGAAAAAGGAAGTAACATGTTGTTATGAGGCAAGGCGTTACAGAGGAGTGAGGAGAAGACCATGGGGGAAGTTTGCTGCAGAAATCCGTGACCCCAAAAGGAAAGGTAGCAGGGTGTGGCTAGGCACGTATGACAGTGAAATTGATGCTGCTAAGGCTTATGATTGTGCTGCCTTCAGAATGAGGGGTCAGAAGGCTGTGTTGAATTTCCCCTTGGAGGCTGGAAAGTCTCATCCACAACCCAACACTTCTGGCAGGAAGAGAAGAAGAGACTACTCTGCAACTGTCACAACTTCAACTCATATTTTGAACAAAATTATAAACTACATCACCCGATGTGATGTTAAATGA 642 0.4268 MATEEEISTLKLMRQYLLGDISDPFLTNLIPVKVEDSSSELDLDSKFSEQSSFCRFLECFDFEADKELSNLTSNHNIQNPFATSPLQNSDLEDPIVPVKKEVTCCYEARRYRGVRRRPWGKFAAEIRDPKRKGSRVWLGTYDSEIDAAKAYDCAAFRMRGQKAVLNFPLEAGKSHPQPNTSGRKRRRDYSATVTTSTHILNKIINYITRCDVK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02669 213 FunFam Ethylene-responsive transcription factor 2 109 170 - -
Viun7g02669 213 PRINTS Ethylene responsive element binding protein signature 150 170 IPR001471 GO:0003700|GO:0006355
Viun7g02669 213 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Viun7g02669 213 SMART rav1_2 110 174 IPR001471 GO:0003700|GO:0006355
Viun7g02669 213 MobiDBLite consensus disorder prediction 170 191 - -
Viun7g02669 213 ProSiteProfiles AP2/ERF domain profile. 110 168 IPR001471 GO:0003700|GO:0006355
Viun7g02669 213 SUPERFAMILY DNA-binding domain 110 170 IPR016177 GO:0003677
Viun7g02669 213 CDD AP2 118 168 IPR001471 GO:0003700|GO:0006355
Viun7g02669 213 Gene3D AP2/ERF domain 109 170 IPR036955 GO:0003700|GO:0006355
Viun7g02669 213 Pfam AP2 domain 110 160 IPR001471 GO:0003700|GO:0006355
Viun7g02669 213 PANTHER DNA-BINDING DOMAIN 80 179 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02669 Viun-Chr7 30300181 30301886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02669 107 187 AP2-EREBP Transcription Factor Family AT5G07580 74.074 1.74e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun7g02669 AP2 4.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02669 - - pvu:PHAVU_007G135900g 342.428