Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02658 ATGAAGGGTACATTTCCAAAGAAGGAAACCTTCACTCAAAAGAAATTTTCAACTTGTTTGCAGGAAATGGCAACAGGATTTTTGGACAATGCAATGATAGGGGGTTCTCACTCATCAATAACATCATCTCAACAACTTCTTTCAAGTTCAAATTCTACCTCAATGAAAGAAGAGGCACCTTTAGCCACATGGATTAGTCACATCCCTGCAAATGTGAGAGAGAAAAACCAATCCAATTCTATCTTCCCAGGTTCAGACACAAAAAACACCTCCATTCCTCTAAATCTTTTGGAAACTCTCCCACCATTGACTATGGCACCATGTTTTGATGAGTCAGTTGCTTCTCTACCCTCTTCTTCTCCCCCACCCAATTTTCCAAACTTGACTTTGGTCCTGCAGGAACCCTCCATGGTGTACTCATCATCATCAAATATGAAAAGTGGTGAGTCTGTAACTTCTAACCCCACTTATCAAGTTCCTTACATTGGGCAAAACCAGCATCAAACAGGTGGTGATGCAGACAAAATGAACAAAAATCTGAAGTCTTTCAATGAGAATTGGTTGAGTAGCACTAGGACTCAGCCTATGAAGTATGGTGGAAGAGGAAAATTGTTTAAAGGGGTGAGGCAGAGACACTGGGGGAAATGGGTTGCTGAGATTAGATTACCAAGAAACAGAACAAGGGTTTGGCTAGGGACTTTTGACACTGCTGAAGATGCTGCCATTGCATATGACACAGCAGCATATATACTGAGAGGAGAATATGCACAGTTGAACTTCCCAGATCTCAAGCATGTAATCCAGGCAAATTCTCTGAATGGAACCACTGCAGCACTTGTGGAGGCAAAACTACAAGCAATATCTCAAGGTTCTCATAGGAAACCTACTGACTCACCAGCAGGCTCAAGCAACAAGAACACTGATGAAAATGCCAAATTGAAAAGTGCAAATGACAAGGATTCAACCATGAAGGAGTGGCAATTTGATACTGAGAGAAGCAAAAGTACACACCATGAGATATCAGATGTGGAAACTGTTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATGAACTTTTGGTCTCTAATTCATGA 1107 0.4137 MKGTFPKKETFTQKKFSTCLQEMATGFLDNAMIGGSHSSITSSQQLLSSSNSTSMKEEAPLATWISHIPANVREKNQSNSIFPGSDTKNTSIPLNLLETLPPLTMAPCFDESVASLPSSSPPPNFPNLTLVLQEPSMVYSSSSNMKSGESVTSNPTYQVPYIGQNQHQTGGDADKMNKNLKSFNENWLSSTRTQPMKYGGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGEYAQLNFPDLKHVIQANSLNGTTAALVEAKLQAISQGSHRKPTDSPAGSSNKNTDENAKLKSANDKDSTMKEWQFDTERSKSTHHEISDVETVQLSRMPSLDMDIIWDELLVSNS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02658 368 Gene3D AP2/ERF domain 204 262 IPR036955 GO:0003700|GO:0006355
Viun7g02658 368 FunFam Ethylene-responsive transcription factor 2 203 262 - -
Viun7g02658 368 Pfam AP2 domain 205 253 IPR001471 GO:0003700|GO:0006355
Viun7g02658 368 PRINTS Ethylene responsive element binding protein signature 205 216 IPR001471 GO:0003700|GO:0006355
Viun7g02658 368 PRINTS Ethylene responsive element binding protein signature 227 243 IPR001471 GO:0003700|GO:0006355
Viun7g02658 368 MobiDBLite consensus disorder prediction 287 342 - -
Viun7g02658 368 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 44 363 - -
Viun7g02658 368 MobiDBLite consensus disorder prediction 311 342 - -
Viun7g02658 368 SMART rav1_2 204 267 IPR001471 GO:0003700|GO:0006355
Viun7g02658 368 MobiDBLite consensus disorder prediction 289 310 - -
Viun7g02658 368 CDD AP2 203 263 IPR001471 GO:0003700|GO:0006355
Viun7g02658 368 SUPERFAMILY DNA-binding domain 204 262 IPR016177 GO:0003677
Viun7g02658 368 ProSiteProfiles AP2/ERF domain profile. 204 261 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02658 Viun-Chr7 30236473 30238149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02658 91 363 AP2-EREBP Transcription Factor Family AT4G13620 44.444 1.94e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun7g02658 AP2 1.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02658 - - gmx:100820013 501.516