Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02647 ATGGCATGGGAGGAACTTATGAGGAAGACTTCTGCTATCTGCAGTCAAACTCACACTATCAAGTACCAGCTTCCTGGAGAGGATCTTGATGCTCTTATATCTGTTTGTTCCAACGAGGATCTTCATCATATGATCGAGGAGTATGAAGAGCTTGAAAGAGCTGGAGCCTCGCAACGGCTGAGGATTTTTCTCATTCCTTTAAATGAATGTGAGAGTTTAAGTTCCAATGAAGCAATAGTCAATCAGCAAAGTGATGTGGATTATCATTATGTTGTTGCTGTTAACAATATGCTGGATCCAAGTCCACAACAGATTTCCAGTGCGCGAAGTTTAGCAAGCCATACAAGCCAGTTTGGAAATACCATTGATTACAACACTCCACATTTTCACAGAGACTCATCCACATCTGCATTTGCTTCAGAGATGAAAGACTGCACCCCAACCTCTCCAAATTTTGCAGGCCTACTCTCAAAACCCAGTCCTCAATATTTTACAGCCCTAGCTGGCCAATCATTCAATCAAATGCCTCCTTTACCTCCTGCTTGTGATCACCAAAATTCTAATGGACAGCTATTTATGGATAAACCATATAATGCTATGAATGAAACCATTACTCCCTTTGTTACGGAAAAAGTTCCACATGACAATACTCTGTATGTAGACAATGCCAATTATGTTGATCCAGTTGCATACTATAACAATCTTGCTCAAGGGCCTAGGCGCGTGAATTACCATCCTAATAATCAATATATAAGGGAGTCTGACCAGATCAGGAGGCCTCGTGAGAATCTTCATCTTCACAGACATAACAGAAGCAACGACTTTGTCACTTCTGCAATATGTAATCTAAATAATACGAGTTATGAGAGACCTTTAATTACCGGTGATGGTTCATATCATTTTAACAATATTGTCTCTCATCCTCACGAGTCTCCAAGTTTATTGTCAGAATCTGATCCTAGAGAGGGATCTCGGTACACAATGTTGCATGCACACTCTGACACAACACTTAACGAGAATGATGAGAACTATAAGGTCCACTTGCAATTTCCCCGCAATGTAGAGAGAGACAATTTTCTATCACGAACAAATTCAAATCATTTAGAAGATTTTTCATTACAGCCTGGAGAGATAGTTGATAGGAAAGAGCACCTGGCTAAGTATCAAAATTTGCCCGTTTTCGGAATTACTAATAGCTATAAGAAAGTATTAGAAATTGGTAAAGAGAGCTTGCAACATGCAGAAAAGAACAATGATTTCTTTGATGAAACGAACAATGCCATAGATTTTAAACATTTACAGCACATCTACACTCCACATGTTGTTTGCTCATCTTCTCCAGATTTACAGAGAAGTGAATGCAATGCATTTACCGAGTCATTTGTCTCTCTCGAATCCCCACTAAACCTGAGGGGGCAAACAAGTGTGGTACAATTAGACAGAACCACTTCTGAGTTTTCCATGAGGAGCCGAAATTCATCAAAAATACATCACCAATATGCTATGTCGGCGGCAGATGACAGTCAACCACTTTTCCCTGGCCCTTTTAAGTCCCAAAATGGCAAAGAATCTTCCTTACCTATCTCATATATGGACATGATTTCTTCCCTGAGAGAGGCTGTTATACCTGTCGGAGATCCTGCGTACTACCTGCACCAGAAGGAAGAAAACACAATCGTTGAGAATCGGACTTCTGAATATATTGATGAATTCTGTGTCAACAGGCCAGTGTCTGATTCCAAGGGACCTACGGATTATATTTCTTCGGGTATCCAGTCATGCTTAAAAGTTGTTTCAAATGTAGATGAAAAGGTTGAAGTTGAACCTACATCTCCTAAAAAGGAAGGGATAGAACGTGATAGTCCAGAATCTGAAAGTAAGCATGCAAGGCCTGAAAGTGGAAACTTGAACAAGTCTACTGGTGATAGAGCAACTGCTGAAACAGAGTCTGAAATTTATGGATTACAGAATATTGAGAATGATGATCTTGAAGAACTGCAAGAGTTGGGATCTGGAACCTTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAAAGCAGTTGTTTCTCGGGTAGATTGTCAGAGCAAGAGCGGTTGATTAAGGACTTCTGGAGGGAGGCACAGATCCTGTCAACTCTTCACCATCCCAATGTGGTGGCGTTTTATGGGGTAGTTCCAAATGGCCCTGGTGGAACACTGGCGACAGTAACGGAATACATGGTGCATGGATCACTCAAGAATGTTCTCATGAAGAGGGAAAAAGTGCTTGACCGTCGTAAAAGGGTCCTGATAGCAATGGATGCAGCCTTTGGGATGGAATATTTGCATTTGAAAAATATTGTGCATTTTGATTTAAAGTGTGATAATTTACTTGTCAATCTGGGCGATCCTGAACGACCTGTATGCAAGGTTGGAGATTTTGGCCTATCCAGAATAAAACGTAATACACTTGTTTCAGGTGGTGTCCGAGGAACCCTTCCATGGATGGCACCTGAATTACTGGATGGTAACAGTTGTAGGGTATCTGAGAAGGTTGATATTTTCTCATTTGGCATTGTAATGTGGGAAATCTTGACTGGGGAAGAACCATATGCTAACATGCACTGTGGCGCTATCATTGGAGGTATTGTCAATAATACGCTCAGGCCTCCTATTCCAAAACGATGTGATTCTGAGTGGAAAAAGCTGATGGAAGAGTGCTGGAGTCCTGATCCTGCCGCAAGACCAACCTTCACAGATATTAAAATTAGACTTCGCAACATATCAGCTGCAGTTCCCAAAAAGAGACATAACATTGGCAATCGATGA 2832 0.41 MAWEELMRKTSAICSQTHTIKYQLPGEDLDALISVCSNEDLHHMIEEYEELERAGASQRLRIFLIPLNECESLSSNEAIVNQQSDVDYHYVVAVNNMLDPSPQQISSARSLASHTSQFGNTIDYNTPHFHRDSSTSAFASEMKDCTPTSPNFAGLLSKPSPQYFTALAGQSFNQMPPLPPACDHQNSNGQLFMDKPYNAMNETITPFVTEKVPHDNTLYVDNANYVDPVAYYNNLAQGPRRVNYHPNNQYIRESDQIRRPRENLHLHRHNRSNDFVTSAICNLNNTSYERPLITGDGSYHFNNIVSHPHESPSLLSESDPREGSRYTMLHAHSDTTLNENDENYKVHLQFPRNVERDNFLSRTNSNHLEDFSLQPGEIVDRKEHLAKYQNLPVFGITNSYKKVLEIGKESLQHAEKNNDFFDETNNAIDFKHLQHIYTPHVVCSSSPDLQRSECNAFTESFVSLESPLNLRGQTSVVQLDRTTSEFSMRSRNSSKIHHQYAMSAADDSQPLFPGPFKSQNGKESSLPISYMDMISSLREAVIPVGDPAYYLHQKEENTIVENRTSEYIDEFCVNRPVSDSKGPTDYISSGIQSCLKVVSNVDEKVEVEPTSPKKEGIERDSPESESKHARPESGNLNKSTGDRATAETESEIYGLQNIENDDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLIKDFWREAQILSTLHHPNVVAFYGVVPNGPGGTLATVTEYMVHGSLKNVLMKREKVLDRRKRVLIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIVMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPAARPTFTDIKIRLRNISAAVPKKRHNIGNR 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02647 943 MobiDBLite consensus disorder prediction 602 632 - -
Viun7g02647 943 Gene3D Phosphorylase Kinase; domain 1 656 750 - -
Viun7g02647 943 PANTHER SERINE-THREONINE PROTEIN KINASE 33 925 - -
Viun7g02647 943 MobiDBLite consensus disorder prediction 602 647 - -
Viun7g02647 943 ProSitePatterns Protein kinases ATP-binding region signature. 669 690 IPR017441 GO:0005524
Viun7g02647 943 SUPERFAMILY CAD & PB1 domains 2 74 - -
Viun7g02647 943 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 751 942 - -
Viun7g02647 943 Pfam PB1 domain 3 64 IPR000270 GO:0005515
Viun7g02647 943 SUPERFAMILY Protein kinase-like (PK-like) 652 923 IPR011009 -
Viun7g02647 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Viun7g02647 943 SMART PB1_new 3 67 IPR000270 GO:0005515
Viun7g02647 943 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 656 750 - -
Viun7g02647 943 PRINTS Tyrosine kinase catalytic domain signature 782 800 IPR001245 GO:0004672|GO:0006468
Viun7g02647 943 PRINTS Tyrosine kinase catalytic domain signature 745 758 IPR001245 GO:0004672|GO:0006468
Viun7g02647 943 PRINTS Tyrosine kinase catalytic domain signature 897 919 IPR001245 GO:0004672|GO:0006468
Viun7g02647 943 PRINTS Tyrosine kinase catalytic domain signature 853 875 IPR001245 GO:0004672|GO:0006468
Viun7g02647 943 SMART serkin_6 663 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02647 943 ProSiteProfiles Protein kinase domain profile. 663 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g02647 943 CDD STKc_MAP3K-like 669 922 - -
Viun7g02647 943 Pfam Protein tyrosine and serine/threonine kinase 665 923 IPR001245 GO:0004672|GO:0006468
Viun7g02647 943 Gene3D Transferase(Phosphotransferase) domain 1 751 942 - -
Viun7g02647 943 Gene3D - 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02647 Viun-Chr7 30166496 30172683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g02647 1 97 MAP Kinase Kinase Kinase AT1G16270 48.485 5.91e-21 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Viun7g02647 PK_Tyr_Ser-Thr 5.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02647 - - gmx:100810711 1490.32